|
Protein |
Sp ref |
Sec |
BLAST |
Exonerate |
Scaffold |
Gene location (strand) |
T-Coffee |
SEBLASTIAN |
||
|
Selenoprot |
SECIS |
SECIS image |
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|
Glutathione peroxidase (GPx) |
||||||||||
|
GPx1 SPP00000004_1.0 |
|
S > S |
|
|
NDFG01000277.1 |
150667 - 151433 (+) |
|
|
|
|
|
GPx2 SPP00000005_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
GPx3 SPP00001033_2.0 |
|
S > S |
|
|
NDFG01000386.1 |
151028 - 152054 (+) |
|
|
|
|
|
|
S > S |
|
|
NDFG01000277.1 |
150631 - 151262 (+) |
|
|
|
|
|
|
GPx3 SPP00000006_1.0 |
|
S > S |
|
|
NDFG01000386.1 |
149976 - 152060 (+) |
|
|
|
|
|
GPx4 SPP00000007_1.0 |
|
S > S |
|
|
NDFG01000059.1 |
151074 - 152391 (+) |
|
|
|
|
|
GPx6 SPP00000009_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
Iodothyronine deiodinase (DIO or DI) |
||||||||||
|
DIO1 SP00001030_2.0 |
|
S > S |
|
|
NDFG01000454.1 |
153734-157525 (-) |
|
|
|
|
|
DI1 SPP00000001_1.0 |
|
S > S |
|
|
NDFG01000454.1 |
152670-156437 (-) |
|
|
|
|
|
DIO2 SPP00001031_2.0 |
|
S > S |
|
|
NDFG01001933.1 |
161743-173486 (-) |
|
|
|
|
|
DI2 SPP00000002_1.0 |
|
S > S |
|
|
NDFG01001933.1 |
161743-173486 (-) |
|
|
|
|
|
DIO3 SPP00001032_2.0 |
|
S > S |
|
|
NDFG01000264.1 |
150773-151546 (+) |
|
|
|
|
|
DI3 SPP00000003_1.0 |
|
S > S |
|
|
NDFG01000264.1 |
150713-151504 (+) |
|
|
|
|
|
Selenophosphate synthetase (SPS) |
||||||||||
|
SPS2 SPP00000033_1.0 |
|
S > N |
|
|
NDFG01000166.1 |
126027 - 134542 (+) |
|
|
|
|
|
Selenoprotein 15 (Sel15) |
||||||||||
|
SPP00001043_2.0 Sel15 SPP00000013_1.0 |
|
S > S |
|
|
NDFG01000454.1 |
170312 - 179643 (-) |
|
|
|
|
|
|
S > S |
|
|
NDFG01000454.1 |
170230 - 191952 (-) |
|
|
|
|
|
|
Selenoprotein H |
||||||||||
|
SelH SPP00000014_1.0 |
|
S > S |
|
|
NDFG01000259.1 |
170239 - 191952 (-) |
|
|
|
|
|
Selenoprotein I |
||||||||||
|
SELENOI SPP00001048_2.0 |
|
S > S |
|
|
NDFG01000016.1 |
161627 - 193351 (-) |
|
|
|
|
|
|
S > N |
|
|
NDFG01000113.1 |
188383 - 242122 (-) |
|
|
|
|
|
|
SelI SPP00000015_1.0 |
|
S > S |
|
|
NDFG01000016.1 |
161609 - 193321 (-) |
|
|
|
|
|
|
S > N |
|
|
NDFG01000113.1 |
180892 - 234632 (-) |
|
|
|
|
|
|
Selenoprotein K |
||||||||||
|
SELENOK(1) SPP00001044_2.0 |
|
S > S |
|
|
NDFG01000277.1 |
150947 - 153852 (-) |
|
|
|
|
|
SelK SPP00000016_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
Selenoprotein M |
||||||||||
|
SelM SPP00000017_1.0 |
|
S > S |
|
|
NDFG01000027.1 |
148959 - 150044 (+) |
|
|
|
|
|
Selenoprotein N |
||||||||||
|
SELENON SPP00001049_2.0 |
|
S > S |
|
|
NDFG01000157.1 |
50581 - 88046 (-) |
|
|
|
|
|
SelN SPP00000018_1.0 |
|
S > N |
|
|
NDFG01000157.1 |
13512 - 98419 (-) |
|
|
|
|
|
Selenoprotein O |
||||||||||
|
SELENOO(1) SPP00001050_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
SELENOO(3) SPP00001052_2.0 |
|
S > S |
|
|
NDFG01000399.1 |
161120 - 172240 (-) |
|
|
|
|
|
SelO SPP00000019_1.0 |
|
S > S |
|
|
NDFG01000399.1 |
159392 - 208327 (-) |
|
|
|
|
|
|
S > N |
|
|
NDFG01000461.1 |
118496 – 167963 (-) |
|
|
|
|
|
|
Selenoprotein P |
||||||||||
|
SELENOP(1) SPP00001054_2.0 |
|
S > S |
|
|
NDFG01000454.1 |
161749 - 122645 (+) |
|
|
|
|
|
SELENOP(2) SPP00001055_2.0 |
|
S > S |
|
|
NDFG01000392.1 |
152256 - 156678 (-) |
|
|
|
|
|
SelP SPP00000020_1.0 |
|
S > S (4/10) |
|
|
NDFG01000392.1 |
154770 - 159540 (-) |
|
|
|
|
|
|
S > S (1/10) |
|
|
NDFG01000454.1 |
150712 - 193674 (+) |
|
|
|
|
|
|
Methionine-R-sufoxide reductase or Selenoprotein R |
||||||||||
|
MSRB1 SPP00001056_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
SelR1 SPP00000021_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
Selenoprotein S |
||||||||||
|
SELENOS SPP00001058_2.0 |
|
S > S |
|
|
NDFG01004278.1 |
150752 - 155788 (-) |
|
|
|
|
|
SelS SPP00000024_1.0 |
|
S > S |
|
|
NDFG01004278.1 |
149167 - 154164 (-) |
|
|
|
|
|
Selenoprotein T |
||||||||||
|
SELENOT SPP00001059_2.0 |
|
S > S |
|
|
NDFG01000007.1 |
154663 - 159434 (+) |
|
|
|
|
|
SelT SPP00000025_1.0 |
|
S > S |
|
|
NDFG01000007.1 |
152209 - 157004 (+) |
|
|
|
|
|
Selenoprotein U |
||||||||||
|
SELENOU SPP00001060_2.0 |
|
S > S |
|
|
NDFG01001614.1 |
153769 - 157538 (-) |
|
|
|
|
|
Selenoprotein V |
||||||||||
|
SelV SPP00000029_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
Selenoprotein W |
||||||||||
|
SelW1 SPP00000030_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
Thioredoxin reductase |
||||||||||
|
TXNRD1 SPP00001061_2.0 |
|
S > S |
|
|
NDFG01000277.1 |
154766 - 161499 (+) |
|
|
|
|
|
|
S > S |
|
|
NDFG01000920.1 |
175036 - 193504 (+) |
|
|
|
|
|
|
TR1 SPP00000034_1.0 |
|
S > S |
|
|
NDFG01000920.1 |
161408 - 183115 (+) |
|
|
|
|
|
|
S > S |
|
|
NDFG01000057.1 |
175587 – 204000 (+) |
|
|
|
|
|
|
TXNRD2 SPP00001062_2.0 |
|
S > S |
|
|
NDFG01000057.1 |
179230 - 206840 (+) |
|
|
|
|
|
TR2 SPP00000035_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
TXNRD3 SPP00001063_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
TR3 SPP00000036_1.0 |
|
S > S |
|
|
NDFG01000277.1 |
139299 - 167961 (+) |
|
|
|
|
