------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 49456 - 49387 Found by: Infernal (score=30.79) Covels (score=23.09) Stem2 length = 9 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -16.7 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((((--(...{[[{(((({(((({(.....---.......)}))))}))))}]]}..--.)-))))))))). target UAAGUACACU--UUAGUGAAGACUACAUAGAAAACC---UCUGAGGUGUAUGAAGUCAGAUGU--CA-GGUGUGCUUU **** ^^^ ****