------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 48813 - 48736 Found by: Infernal (score=23.45) Covels (score=27.52) Stem2 length = 11 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -8.55 ..(((((((.......(((((((((((((((.................))))))))))))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ..(((((((.--....{[[((((((((((((.................))))))))))))]]}.....-...))))))).. target GAGUUGUUGU--UAUGUGAAGACAAAAAUAGCAAGUCAGGAAUCUGAUCUGUUUUUGUCUGAUGUCUU-AACUAAUAGUAC **** ^^ ****