------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = + Positions = 50796 - 50860 Found by: Infernal (score=28.57) Covels (score=15.07) Stem2 length = 10 Apical loop length = 9 Insertion in stem2 = 1, 0 Free Energy = -12.0 ..(((((((.......((((((((((.(((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((([(((((---....{[[{((((((.((((......--------...))))))))))}]]}..--..-.)))))]))) target CAGAUUUUG---CUUGUGAUGGUGCAUCUUCCAAAUC--------CUUGAAGUGUGCCUGAUGU--UU-UCAAAAGUUG **** ^^^ ****