------- SECIS element -- id:1 -- grade:A ----
 Chromosome = your_sequence Strand = - Positions = 48178 - 48107
 Found by:  Infernal (score=36.54) Covels (score=35.74)
 Stem2 length = 11   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -23.64

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(({(((((--....{[[(((((((((([(.....-.........)]))))))))))]]}..--..-)))))}))..
 target  UCUGCUUGCA--UUUGUGAGGACAGGAGCAUAAACU-AUGACCUAGGGGCUCCUGUCUGAUGU--UU-UGCAAUCAAG
                         ****           ^^^                       ****                 

------- SECIS element -- id:2 -- grade:A ----
 Chromosome = your_sequence Strand = - Positions = 47393 - 47325
 Found by:  Infernal (score=21.68) Covels (score=15.64)
 Stem2 length = 10   Apical loop length = 10   Insertion in stem2 = 0, 0
 Free Energy = -15.1

         ..(((((((.......((((((((((.(((((...............))))).))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggc-caggcCuGAUGuuuuuucaugaccggc
         .((({((((---....([[{((((({{(((((........-----..)))))}})))))}]])..--..-.))))}))).
 target  ACACCAUAA---UUAAUGAUGGUUUAAUAGGGAAAUUACU-----ACUCCUACAAAACCUGAAUC--UU-UUUAUUGUGA
                         ****            ^^^                        ****