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Selenoproteins


The following table shows our results regarding selenoproteins. In the items strand, tblastn, tcoffee, seblastian and secis you can download our results raw files.The legend of the table is shown below:

legend

Protein
Query
Residue
Scaffold
Initial position
Final position
Strand
tblastn
tcoffee
seblastian
SECIS
Thyroid hormone deodinase family (DIO)
DIO1
U
VONY01000009.1
4529411
4532223
(-)
DIO2
U
VONY01001224.1
38104204
38115625
(-)
DIO3
U
VONY01001224.1
46552087
46552860
(+)
Glutathione Peroxidases (GPx)
GPx1
U
VONY01000200.1
18155703
18156370
(-)
GPx2
U
VONY01001224.1
420201
420598
(-)
GPx3
U
VONY01000288.1
12038390
12039265
(-)
GPx4
-
-
-
-
(-)
GPx7
C
VONY01000009.1
5157771
5160051
(-)
GPx8
-
-
-
-
-
Methionine-R-Sulfoxide Reductase 1 (Msr)
MsrA
C
VONY01000317.1
102510276
102621193
(+)
MsrB1
U
VONY01001437.1
5688118
5688718
(-)
MsrB3
C
VONY01001511.1
149241942
149290208
(-)
15-kDa Selenoprotein
Sel15
U
VONY01000009.1
13352829
13367630
(-)
SelenoM
SelenoM
C
VONY01000045.1
2685737
2686024
(+)
Rdx family
SelenoH
-
-
-
-
-
SelenoH
U
VONY01001224.1
15351056
15351384
(-)
SelenoT
U
VONY01001093.1
22073598
22077470
(-)
Selenoprotein I
SelenoI
U
VONY01000317.1
104050766
104069575
(-)
Selenoprotein K and Selenoprotein S
SelenoK
U
VONY01000200.1
5666616
5669976
(+)
SelenoS
U
VONY01000010.1
16370958
16375125
(-)
Selenoprotein N
SelenoN
U
VONY01000726.1
3262995
3275771
(+)
Selenoprotein O
SelenoO
U
VONY01001511.1
162163170
162172972
(-)
Selenoprotein P
SelenoP_1
-
-
-
-
(-)
SelenoP_2
U
VONY01000009.1
8541436
8541880
(-)
SelenoU
SelenoU1
U
VONY01000599.1
23228539
23234114
(+)
Thioredoxin Reductases (TXNRD)
TXNRD_1
U
VONY01001511.1
129732357
129752732
(+)
TXNRD_2
U
VONY01000045.1
5852435
5882796
(-)
TXNRD_3
U
VONY01000200.1
2703349
2721585
(-)
Selenoprotein W
SelenoW
-
-
-
-
(-)

Selenoprotein machinery


The following table shows our results regarding selenoprotein machinery. As before, in the items strand, tblastn, tcoffee, seblastian and secis you can download our results raw files.


Protein
Query
Residue
Scaffold
Initial position
Final position
Strand
tblastn
tcoffee
seblastian
SECIS
eEFsec
C
VONY01000200.1
3590938
3671321
(+)
PSTK
C
VONY01000599.1
3653119
3655171
(-)
SepHS
C
VONY01001511.1
174670571
174689551
(+)
SBP2_2
C
VONY01000010.1
9326108
9338556
(-)
SECp43
C
VONY01000726.1
3002987
3014857
(+)
SecS_2
C
VONY01000583.1
50270083
50291308
(+)