Have a look to our
Results
In this section, we show the results obtained in the different steps during the selenoproteins comparison with mouse and lizard.
Map legend
 |
Compared with Mus musculus |  |
Available file for this field |  |
Residue of selenocysteine was found |
 |
Compared with Anolis carolinensis |  |
Not available file for this field |  |
Residue of selenocysteine was not found |
Table of results
| Protein | Species | Query | Scaffold | Residue | Tblastn | Exonerate | T-coffee | SECIS candidate | SECIS image | Seblastian | Thioredoxin reductase |
|---|---|---|---|---|---|---|---|---|---|---|
| TR1 | |
|
ML683785.1 | |
|
|
|
|
 |
|
| TR2 | |
|
ML683833.1 | |
|
|
|
|
|
|
| TR3 | |
|
ML683830.1 | |
|
|
|
|
|
|
Glutathione peroxidase |
| GPX1 | |
|
ML683830.1 | |
|
|
|
|
 |
|
| GPX2 | |
|
ML683816.1 | |
|
|
|
|
 |
|
| GPX3 | |
|
ML683799.1 | |
|
| |
|
|
|
| GPX4 | |
|
ML683883.1 | |
|
|
|
|
 |
|
| GPX5 | |
|
ML683799.1 | |
|
|
|
|
|
|
| GPX6 | |
|
ML683799.1 | |
|
|
|
|
|
|
| GPX7 | |
|
ML683911.1 | |
|
|
|
|
|
|
| GPX8 | |
|
ML683798.1 | |
|
|
|
|
|
|
Iodothyronine deiodinase |
| DI1 | |
|
ML683816.1 | |
|
|
|
|
 |
|
| DI2 | |
|
ML683816.1 | |
|
|
|
|
 |
|
Selenoprotein P |
| Sel P | |
|
ML683798.1 | |
|
|
|
|
 |
|
Selenoprotein W |
| Sel W2 | |
|
ML683865.1 | |
|
|
|
|
 |
|
Selenoprotein S |
| Sel S | |
|
- | - | |
|
|
|
|
|
Selenoprotein 15 |
| Sel 15 | |
|
ML683911.1 | |
|
|
|
|
 |
|
Selenoprotein M |
| Sel M | |
|
ML683833.1 | |
|
|
|
|
 |
|
Selenoprotein R |
| MSRB1 | |
|
ML683829.1 | |
|
|
|
|
 |
|
| MSRB2 | |
|
- | - | |
|
|
|
|
|
| MSRB3 | |
|
ML683785.1 | |
|
|
|
|
|
|
Methionine sulfoxide reductase A |
| MSRA | |
|
ML683911.1 | |
|
|
|
|
|
|
Selenoprotein U |
| Sel U1 | |
|
ML683777.1 | |
|
|
|
|
 |
|
| Sel U2 | |
|
ML683929.1 | |
|
|
|
|
|
|
Selenoprotein T |
| Sel T | |
|
ML683883.1 | |
|
|
|
|
 |
|
Selenoprotein H |
| Sel H | |
|
ML683816.1 | |
|
|
|
|
 |
|
Selenoprotein I |
| Sel I | |
|
ML683834.1 | |
|
|
|
|
 |
 |
Selenoprotein K |
| Sel K | |
|
- | - | |
|
|
|
|
|
Selenoprotein O |
| Sel O | |
|
ML683802.1 | |
|
|
|
|
|
|
Selenoprotein N |
| Sel N (a) | |
|
ML683823.1 | |
|
|
|
|
 |
|
| Sel N (b) | |
|
ML683824.1 | |
|
|
|
|
 |
|
Translation machinery |
| eEFsec | |
|
ML683830.1 | |
|
|
|
|
|
|
| Sbp 2 | |
|
ML683808.1 | |
|
|
|
|
|
|
| Pstk | |
|
ML683777.1 | |
|
|
|
|
|
|
| Secp43 | |
|
- | - | |
|
|
|
|
|
| SecS | |
|
ML683766.1 | |
|
|
|
|
|
|
| SPS1 | |
|
ML683785.1 | |
|
|
|
|
|
|
| SPS2 | |
|
ML683863.1 | |
|
|
|
|
 |
|