Selenoproteïnes de Taeniopygia guttata


Resultats


Selenoproteïnes

La següent taula ens mostra la presència de gens codificants per selenoproteïnes en el genoma de Taenopygia guttata.

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Família Proteïna ID tBLASTn Scaffold Exonerate Posició del gen T-Coffee SECIS Seq SECIS
DIO DIO1 SPP00001030_2.0 MUGN01002946.1

MUGN01000893.1

50329-50329(-)

50329-46562(-)



DIO2 SPP00001031_2.0 MUGN01002174.1

MUGN01001095.1

39082-50572(+)

39110-50572(+)



DIO3 SPP00001032_2.0 MUGN01002714.1

MUGN01001095.1

50000-100773(-)

50000-100773(-)



GPx GPx3 SPP00001033_2.0 MUGN01001966.1

MUGN01001067.1

MUGN01002945.1

MUGN01001019.1



49708-50737(+)

49689-50722(+)

38821-38204(-)

50000-50323 (-)









GPx7 SPP00001034_2.0 MUGN01001896.1

MUGN01000893.1

MUGN01000446.1


50269-48092(-)

50269-48089(-)

46198-485498(+)






GPx8 SPP00001035_2.0 MUGN01000446.1

MUGN01000893.1

MUGN01001896.1


46198-48543(+)

5026o-48086(-)

50260-48089(-)






MsrA MsrA SPP00001036_2.0 MUGN01000892.1 50000-50164(+)
MSRB MSRB1 SPP00001056_2.0 MUGN01000297.1

MUGN01000709.1

49698-50821(+)

50474-49509(-)



MSRB3 SPP00001057_2.0 MUGN01003172.1

MUGN01000619.1

92905-50000(-)

93125-50000(-)



Sel15 Sel15 SPP00001043_2.0 MUGN01001982.1

MUGN01001129.1

29867-50140(+)

29867-50140(+)



SelH SelH SPP00001047_2.0
SelI SelI SPP00001048_2.0 MUGN01000527.1

MUGN01000527.1

75922-39452(-)

23506-100326(+)



SelK SelK1 SPP00001044_2.0
SelK2 SPP00001045_2.0
SelK3 SPP00001046_2.0
SelN SELENON SPP00001049_2.0 MUGN01002069.1

MUGN01000692.1

53585-42189(-)

53735-42831(-)



SelO SelO1 SPP00001050_2.0 MUGN01000496.1

MUGN01002978.1

50779-45487(-)

50779-45481(-)



SelO2 SPP00001051_2.0 MUGN01000377.1

MUGN01002083.1

50417-30942(-)

50417-30940(-)



SelO3 SPP00001052_2.0 MUGN01000496.1

MUGN01002978.1

50417-30942(-)

50417-30940(-)



SelO4 SPP00001053_2.0 MUGN01000496.1

MUGN01002978.1

50392-48748(-)

50392-48750(-)



SelP SelP1 SPP00001054_2.0 MUGN01001898.1

MUGN01000706.1

49764-51264(+)

49764-51269(+)



SelP2 SPP00001055_2.0 MUGN01000803.1 51588-47236(-)
SelS SelS SPP00001057_2.0
SelT SelT SPP00001059_2.0 MUGN01000668.1 52617-47858(-)
SelU SelU SPP00001060_2.0 MUGN01002246.1

MUGN01001040.1

53733-50000(-)

53733-50000(-)



TXNRD TXNRD1 SPP00001061_2.0 MUGN01001627.1

MUGN01001019.1.1

MUGN01002868.1

MUGN01000779.1



55296-46845(-)

552999-46816(-)

55015-33439(-)

100386-33456(-)









TXNRD2 SPP00001062_2.0 MUGN01002432.1

MUGN01000423.1

33456-67263(+)

39471-67248(+)



TXNRD3 SPP00001063_2.0 MUGN01001627.1

MUGN01001019.1

MUGN01000779.1


62803-46659(-)

62815-46630(-)

56528-38308(-)







Maquinària

Aquesta taula ens mostra la presència de gens que codifiquen per les proteïnes de la maquinària.

Família Proteïna ID tBLASTn Scaffold Exonerate Posició del gen T-Coffee SECIS Seq SECIS
eEFsec eEFsec SPP00001064_2.0 MUGN01002476.1

MUGN01001019.1

17419-65172(+)

17496-65467(+)



PSTK PSTK SPP00001036_2.0 MUGN01000580.1

MUGN01003105.1

2020653-2120850(-)

1922444-2022641(-)



SBP2 SBP21 SPP00001037_2.0 MUGN01002312.1

MUGN01000131.1

64755-50000(-)

64733-50000(-)



SBP22 SPP00001038_2.0 MUGN01002073.1

MUGN01001104.1

62338-57984(-)

62337-100221(-)



SBP23 SPP00001039_2.0 MUGN01002312.1

MUGN01000131.1

50000-50218(-)

50000-50218(-)



SECp43 SECp43 SPP00001066_2.0 MUGN01001143.1 45932-57718(+)
SecS SecS1 SPP00001041_2.0 MUGN01001975.1

MUGN01000611.1

49795-56698(+)

49795-56707(+)



SecS2 SPP00001042_2.0 MUGN01000611.1

MUGN01001975.1

46027-66028(+)

46044-66033(+)



SEPHS SEPHS SPP00001040_2.0 MUGN01000356.1

MUGN01001542.1

MUGN01000881.1


69530-50000(-)

69536-50000(-)

54825-56406(-)