In the next tables we show the prediction of the selenoproteins and other related genes in the genome of Sporophila hypoxantha with links (
) of the output files available, include:
- - the species of reference: chicken (
) or human (
), and its protein sequence - - if the query contains a Sec (S), Cys (C), another AA (i.e. Thr, T) or none of them (N) compared to the species of reference (sp ref > our sp)
- - if the tBLASTn found hits
- - the exonerate file
- - the name of the scaffold
- - the location of the predicted gene and the strand
- - the T-Coffee alignment
- - the Seblastian output: selenoprotein prediction and alignment
, SECIS prediction and sequence , and the image of the best predicted SECIS with the higher score This is the legend of symbols used in them:
