|
Protein |
Sp ref |
Sec |
BLAST |
Exonerate |
Scaffold |
Gene location (strand) |
T-Coffee |
SEBLASTIAN |
||
|
Selenoprot |
SECIS |
SECIS image |
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|
|
Eukaryotic elongation factor (eEFsec) |
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|
SPP00001064_2.0 eEFsec SPP00000038_1.0 |
|
N > N |
|
|
NDFG01000277.1 |
238734 - 360609 (-) |
|
|
|
|
|
|
N > N |
|
|
NDFG01000277.1 |
271884 - 393768 (-) |
|
|
|
|
|
|
|
Glutathione peroxidase (GPx) |
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|
GPx5 SPP00000008_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
SPP00001034_2.0 GPx7 SPP00000010_1.0 |
|
C > C |
|
|
NDFG01000454.1 |
152237 - 154474 (-) |
|
|
|
|
|
|
C > C |
|
|
NDFG01000454.1 |
158411 - 166858 (-) |
|
|
|
|
|
|
GPx8 SPP00001035_2.0 |
|
C > C |
|
|
NDFG01000392.1 |
152334 - 154668 (+) |
|
|
|
|
|
GPx8 SPP00000011_1.0 |
|
C > C |
|
|
NDFG01000392.1 |
153226 - 156452 (+) |
|
|
|
|
|
|
C > C |
|
|
NDFG01000454.1 |
152264 - 160748 (-) |
|
|
|
|
|
|
|
Methionine sulfoxide reductase A (MsrA) |
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|
SPP00001036_2.0 MsrA SPP00000012_1.0 |
|
N > N |
|
|
NDFG01000412.1 |
247379-344758 (+) |
|
|
|
|
|
|
C > C |
|
|
NDFG01000412.1 |
200575-326347 (+) |
|
|
|
|
|
|
|
Phosphoseryl-tRNA kinase |
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|
PSTK SPP00001065_2.0 |
|
N > S |
|
|
NDFG01000845.1 |
73553-76959 (+) |
|
|
|
|
|
|
SECIS binding protein (SBP2) |
|||||||||
|
SBP2(1) SPP00001037_2.0 |
|
N > N |
|
|
NDFG01000168.1 |
165188-179644 (-) |
|
|
|
|
|
SBP2(2) SPP00001038_2.0 |
|
N > N |
|
|
NDFG01000251.1 |
171903-201785 (-) |
|
|
|
|
|
SBP2(3) SPP00001039_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
SBP2 SPP00000037_1.0 |
|
N > N |
|
|
NDFG01000251.1 |
168963-207939 (-) |
|
|
|
|
|
|
N > N |
|
|
NDFG01000168.1 |
115026-206189 (-) |
|
|
|
|
|
|
|
Selenocysteine synthase (SecS) |
|||||||||
|
SecS(1) SPP00001041_2.0 |
|
N > N |
|
|
NDFG01000445.1 |
156877-163754 (-) |
|
|
|
|
|
|
N > N |
|
|
NDFG01000010.1 |
146104-150738 (-) |
|
|
|
|
|
|
SecS(2) SPP00001042_2.0 |
|
N > N |
|
|
NDFG01000445.1 |
170136-190272 (-) |
|
|
|
|
|
|
Selenophosphate synthetase |
|||||||||
|
SEPHS SPP0001040_2.0 |
|
T > T |
|
|
NDFG01000530.1 |
170772 - 191544 (-) |
|
|
|
|
|
|
T > N |
|
|
NDFG01000166.1 |
126075 - 140181 (+) |
|
|
|
|
|
|
SPS1 SPP00000032_1.0 |
|
T > T |
|
|
NDFG01000530.1 |
170772 - 191544 (-) |
|
|
|
|
|
|
T > N |
|
|
NDFG01000166.1 |
126075 - 140181 (+) |
|
|
|
|
|
|
|
Selenoprotein H |
|||||||||
|
SELENOH SPP00001047_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
|
Selenoprotein K |
|||||||||
|
SELENOK(2) SPP00001045_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
SELENOK(3) SPP00001046_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
|
Selenoprotein O |
|||||||||
|
SELENOO(2) SPP00001051_2.0 |
|
N > N |
|
|
NDFG01000461.1 |
161120 - 172240 (-) |
|
|
|
|
|
SELENOO(4) SPP00001053_2.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
|
Methionine-R-sufoxide reductase or Selenoprotein R |
|||||||||
|
SelR2 SPP00000022_1.0 |
|
C > C |
|
|
NDFG01000461.1 |
130061 - 165620 (+) |
|
|
|
|
|
MSRB3 SPP00001057_2.0 |
|
C > C |
|
|
NDFG01000399.1 |
193342 - 278034 (-) |
|
|
|
|
|
SelR3 SPP00000023_1.0 |
|
C > C |
|
|
NDFG01000399.1 |
183010 - 269645 (-) |
|
|
|
|
|
|
Selenoprotein U |
|||||||||
|
SelU1 SPP00000026_1.0 |
|
C > S |
|
|
NDFG01001614.1 |
153775 - 157550 (-) |
|
|
|
|
|
SelU2 SPP00000027_1.0 |
|
C > C |
|
|
NDFG01000251.1 |
152711 - 156538 (+) |
|
|
|
|
|
SelU3 SPP00000028_1.0 |
|
- |
|
- |
- |
- |
- |
- |
- |
- |
|
|
Selenoprotein W |
|||||||||
|
SelW2 SPP00000031_1.0 |
|
C > C |
|
|
NDFG01000706.1 |
666 - 1855 (-) |
|
|
|
|
|
|
tRNA Sec 1 associated protein 1 (SECp43) |
|||||||||
|
SECp43 SPP00001066_2.0 |
|
N > N |
|
|
NDFG01000063.1 |
163239 - 176484 (+) |
|
|
|
|
|
|
N > N |
|
|
NDFG01000604.1 |
154825 - 208248 (-) |
|
|
|
|
|
