Abstract Introduction Materials & Methods Results Discussion Conclusions References

Selenoproteins analysis

DI1

DI2

DI3

GPx

GPx1

GPx2

GPx4

GPx5

GPx6

GPx7

GPx8

Sel15

SelH

SelI

SelK

SelM

SelN

SelO

SelP

SelR1

SelS

SelT

SelW

TR1

TR2

TR3

Machinery analysis

eEFsec

PTSK

SBP2

SECp43

SecS

SPS1

SPS2

Cys-homologues analysis

GPx7

GPx8

MsrA

SelR3

SelU1

SelU2

 

Selenoproteins analysis

All selenoproteins found in Balaenoptera acutorostrata have been obtained using the query of different species, as detailed below.

DI1

Comparison with DI1 of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537096.1 96,52 13372651 13372307 4E-69 Structure Sequence

DI2

Comparison with DI2 of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538108.1 90,82 3922741 3922121 4E-21 Structure Sequence

DI3

Comparison with DI3 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537651.1 98,08 133101335 13309538 4E-172 Structure Sequence

GPx

Comparison with GPx of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537586.1 96 2116987 2116838 6E-27 Structure Sequence

GPx1

Comparison with GPx1 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537319.1 94,12 1939406 1939762 4E-70 Structure Sequence

GPx2

Comparison with GPx2 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537886.1 78,67 2203774 2203352 5E-71 Structure Sequence

GPx3

Comparison with GPx3 of E. caballus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538108.1 90,16 903583 903401 2E-32 Structure Sequence

GPx4

Comparison with GPx4 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537586.1 91,84 2117264 2117118 5E-34 Structure Sequence

GPx6

Comparació GPx6 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537663.1 83,10 1151445 1151233 7E-35 Structure Sequence

Sel15

Comparison with Sel15 of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537467.1 88,24 4339933 4339730 2E-20 Structure Sequence

SelH

Comparison with SelH of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538536.1 73,11 7335258 7335614 7E-36 Structure Sequence

SelI

Comparison with SelI of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538253.1 94,51 1519374 1519646 2E-35 Structure Sequence

SelK

Comparison with SelK of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537537.1 88,57 1963592 1963488 2E-12 Structure Sequence

SelM

Comparison with SelM of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537401.1 96,3 805341 805502 5E-25 Structure Sequence

SelN

Comparison with SelN of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537648.1 95,35 939264 939136 6E-15 Structure Sequence

SelO*

Comparison with SelO of E. caballus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538131.1 80,95 11751581 11751769 2E-43 Structure Sequence

SelP

Comparison with SelP of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538471.1 79,78 3715058 3714792 4E-38 E1 E2 Sequence

SelR1

Comparison with SelR1 of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537749.1 98,08 5903631 5903786 3E-27 Structure Sequence

SelS

Comparison with SelS of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537668.1 96,43 2980583 2980666 3E-8 Structure Sequence

SelT

Comparison with SelT of T. truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537881.1 75,5 193734 194333 8E-94 Structure Sequence

SelW

Comparison with SelW of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537293.1 100 4165820 4165894 4E-9 Structure Sequence

TR

Comparison with TR of T. truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537194.1 79,69 7761998 7761807 2E-23 Structure Sequence

TR1

Comparison with TR1 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537194.1 89,5 7766581 7766342 3E-39 Structure Sequence

TR2

Comparison with TR2 of E. caballus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538526.1 63,53 5998784 5999038 2E-21 Structure Sequence

TR3

Comparison with TR3 of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537815.1 93,88 502841 502987 2E-19 Structure Sequence

Machinery elements analysis

eEFsec

Comparison with eEFsec of E. caballus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537675.1 89,59 1175911 1175249 4E-132

PSTK

Comparison with PSTK of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537470.1 98,84 14272944 14273201 9E-48

SBP2

Comparison with SBP2 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538386.1 98,65 1254372 1254593 3E-29

SECp43

Comparison with SECp43 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537394.1 93,75 1637017 1637160 2E-20

SecS

Comparison with SecS of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537300.1 93,68 2890711 2890427 3E-48

SPS1

Comparison with SPS1 of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538175.1 100 11516270 11516055 4E-38

SPS2

Comparison with SPS2 of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537994.1 98,6 4582956 4581670 0 Structure Sequence

Cys-homologues analysis

GPx5

Comparison with GPx5 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537663.1 54,63 1185138 1185449 1E-30

GPx7

Comparison with GPx7 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537096.1 79,13 14602297 14601953 2E-51

GPx8

Comparison with GPx8 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538471.1 88,64 10619283 10619546 8E-45

MsrA

Comparison with MsrA of T.truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI538342.1 98,11 8953841 8953677 1E-28

SelR3

Comparison with SelR3 of T. truncatus

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537679.1 98,18 17725386 17725550 2E-16

SelU1

Comparison with SelU1 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537623.1 89,29 2174590 2174423 1E-24

SelU2

Comparison with SelU2 of H. sapiens

BLAST EXONERATE PREDICTED PROTEIN T-COFFEE SECIS
Scaffold Similarity Start pos End pos E-value
KI537598.1 78,95 31262201 31262031 2E-19
Components del grup: Mar Costa, Anna González, Clara Mayayo, Isshak Mrabet, Mirna Muntal