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In search of selenoproteins in the world's smallest mammal

-Craseonycteris thonglongyai-

RESULTS

Here we present our results for the selenoproteome of Craseonycteris thonglongyai. If more than one bat symbol is found in the same cell that means that these protein was found to be truncated into more than one scaffold.

Homo sapiens = Query

It is found in Craseonycteris thonglongyai

It is not found in Craseonycteris thonglongyai

SELENOPROTEINS

Protein Reference sp. Residue Blast Exonerate Scaffold Gene location Predicted sequence Predicted protein T-coffee SECIS prediction Protein sequence
(Seblastian) SECIS image Multiple
alignment Complete AA
prediction Coverage
type I Coverage
type II

Sep15 Selenocysteine PVKE010007457.1 45336-45285
Strand + 82% 91%

Glutathione peroxidase family

GPx1 Selenocysteine PVKE010063236.1 1272-2105
Strand - 88% 95%

GPx2 Selenocysteine PVKE010009682.1 28441-31318
Strand + 96% 99%

GPx3 Selenocysteine PVKE010005934.1 19598-26684
Strand - 89% 97%

GPx4 Selenocysteine PVKE010004804.1 42888-45191
Strand - 92% 98%

GPx5 No selenocysteine PVKE010005899.1 814-11800
Strand + 76% 92%

GPx6 Selenocysteine PVKE010018851.1 20411-28950
Strand - 79% 91%

GPx7 No selenocysteine PVKE010001538.1 85891-92131
Strand + 93% 98%

GPx8 No selenocysteine PVKE010023323.1 12001-15826
Strand + 88% 97%

Iodothyronine deiodinase family

DI1 Selenocysteine PVKE010001208.1
PVKE010040570.1 3627-9894 (-)
10322-12552 (-) 82% 93%

DI2 Selenocysteine PVKE010012833.1
12803-23651
Strand + 91% 98%

DI3 Selenocysteine PVKE010002073.1
86787-87626
Strand + 92% 98%

MsrA Selenocysteine PVKE010012352.1
PVKE010003299.1
PVKE010096847.1 24776-24931 (+)
5506-42079 (-)
2313-2447 (-) 70% 78%

SelH Selenocysteine PVKE010003995.1
55672-56232
Strand - 85% 94%

SelI Selenocysteine PVKE010011700.1
PVKE010039195.1 14495-37652 (+)
3316-7843 (+) 94% 99%

SelK Selenocysteine PVKE010000173.1 168502-173733
Strand - 98% 100%

SelM Selenocysteine PVKE010015265.1 6102-8401
Strand - 77% 90%

SelN Selenocysteine PVKE010010817.1 144-13253
Strand + 78% 85%

SelO Selenocysteine PVKE010014341.1 1195-14836
Strand + 83% 93%

SelP Selenocysteine PVKE010010787.1 20640-27008
Strand - 72% 88%

Selenoprotein R family

SelR1 Selenocysteine PVKE010006209.1 45291-48910
Strand - 91% 96%

SelR2 No selenocysteine PVKE010012725.1 9332-28246
Strand - 71% 86%

SelR3 No selenocysteine PVKE010008082.1
PVKE010015543.1 4551-41021 (-)
2338-17116 (+) 81% 95%

SelS Selenocysteine PVKE010010535.1 15184-24133
Strand + 82% 96%

SelT Selenocysteine PVKE010000592.1 10196-28319
Strand - 94% 99%

Selenoprotein U family

SelU1 No selenocysteine PVKE010001609.1 68160-78315
Strand - 90% 97%

SelU2 No selenocysteine PVKE010002044.1 36649-43999
Strand + 87% 96%

SelU3 No selenocysteine PVKE010028091.1 26-2480
Strand + 88% 96%

SelV Selenocysteine PVKE010006012.1 8358-39015
Strand + 56% 80%

Selenoprotein W family

SelW1 Selenocysteine PVKE010004680.1 15552-17686
Strand - 94% 98%

SelW2 No selenocysteine PVKE010000318.1 156080-157059
Strand - 89% 95%

Thioredoxin reductase family

TR1 No selenocysteine PVKE010016090.1 1925-28756
Strand + 89% 96%

TR2 Selenocysteine PVKE010000238.1 79941-122550
Strand - 85% 90%

TR3 Selenocysteine PVKE010034544.1
PVKE010031651.1
PVKE010019712.1 2115-16059 (-)
8026-15278 (-)
4243-6832 (+) 62% 67%

MACHINERY PROTEINS

Protein Reference sp. Residue Blast Exonerate Scaffold Gene location Predicted sequence Predicted protein T-coffee SECIS prediction Protein sequence
(Seblastian) SECIS image Multiple
alignment Complete AA
prediction Coverage
type I Coverage
type II

eEFSec No selenocysteine PVKE010007345.1
PVKE010075947.1
PVKE010012895.1 2227-48794 (-)
2697-3056 (-)
32552-36780 (+) 68% 78%

SBP2 No selenocysteine PVKE010008993.1
PVKE010037555.1 1458-6220 (+)
1410-15329 (-) 64% 83%

SecS No selenocysteine PVKE010021348.1
PVKE010024052.1 4683-24422 (+)
3155-13210 (+) 98% 99%

SecP43 No selenocysteine PVKE010020672.1
PVKE010053199.1
PVKE010014577.1 23551-24166 (+)
547-9478 (+)
1094-3172 (+) 98% 99%

PSTK No selenocysteine PVKE010012691.1 19003-24832
Strand + 72% 87%

SPS2 Selenocysteine PVKE010007810.1.1 26507-27847
Strand - 91% 99%

SPS1 No selenocysteine PVKE010001866.1 50000-66938
Strand + 99% 100%

	Homo sapiens = Query
	It is found in Craseonycteris thonglongyai
	It is not found in Craseonycteris thonglongyai

Protein	Residue	Scaffold	Gene location	Coverage type I	Coverage type II

Sep15	Selenocysteine	PVKE010007457.1	45336-45285 Strand +	82%	91%
Glutathione peroxidase family
GPx1	Selenocysteine	PVKE010063236.1	1272-2105 Strand -	88%	95%
GPx2	Selenocysteine	PVKE010009682.1	28441-31318 Strand +	96%	99%
GPx3	Selenocysteine	PVKE010005934.1	19598-26684 Strand -	89%	97%
GPx4	Selenocysteine	PVKE010004804.1	42888-45191 Strand -	92%	98%
GPx5	No selenocysteine	PVKE010005899.1	814-11800 Strand +	76%	92%
GPx6	Selenocysteine	PVKE010018851.1	20411-28950 Strand -	79%	91%
GPx7	No selenocysteine	PVKE010001538.1	85891-92131 Strand +	93%	98%
GPx8	No selenocysteine	PVKE010023323.1	12001-15826 Strand +	88%	97%
Iodothyronine deiodinase family
DI1	Selenocysteine	PVKE010001208.1 PVKE010040570.1	3627-9894 (-) 10322-12552 (-)	82%	93%
DI2	Selenocysteine	PVKE010012833.1	12803-23651 Strand +	91%	98%
DI3	Selenocysteine	PVKE010002073.1	86787-87626 Strand +	92%	98%

MsrA	Selenocysteine	PVKE010012352.1 PVKE010003299.1 PVKE010096847.1	24776-24931 (+) 5506-42079 (-) 2313-2447 (-)	70%	78%

SelH	Selenocysteine	PVKE010003995.1	55672-56232 Strand -	85%	94%

SelI	Selenocysteine	PVKE010011700.1 PVKE010039195.1	14495-37652 (+) 3316-7843 (+)	94%	99%

SelK	Selenocysteine	PVKE010000173.1	168502-173733 Strand -	98%	100%

SelM	Selenocysteine	PVKE010015265.1	6102-8401 Strand -	77%	90%

SelN	Selenocysteine	PVKE010010817.1	144-13253 Strand +	78%	85%

SelO	Selenocysteine	PVKE010014341.1	1195-14836 Strand +	83%	93%

SelP	Selenocysteine	PVKE010010787.1	20640-27008 Strand -	72%	88%
Selenoprotein R family
SelR1	Selenocysteine	PVKE010006209.1	45291-48910 Strand -	91%	96%
SelR2	No selenocysteine	PVKE010012725.1	9332-28246 Strand -	71%	86%
SelR3	No selenocysteine	PVKE010008082.1 PVKE010015543.1	4551-41021 (-) 2338-17116 (+)	81%	95%

SelS	Selenocysteine	PVKE010010535.1	15184-24133 Strand +	82%	96%

SelT	Selenocysteine	PVKE010000592.1	10196-28319 Strand -	94%	99%
Selenoprotein U family
SelU1	No selenocysteine	PVKE010001609.1	68160-78315 Strand -	90%	97%
SelU2	No selenocysteine	PVKE010002044.1	36649-43999 Strand +	87%	96%
SelU3	No selenocysteine	PVKE010028091.1	26-2480 Strand +	88%	96%

SelV	Selenocysteine	PVKE010006012.1	8358-39015 Strand +	56%	80%
Selenoprotein W family
SelW1	Selenocysteine	PVKE010004680.1	15552-17686 Strand -	94%	98%
SelW2	No selenocysteine	PVKE010000318.1	156080-157059 Strand -	89%	95%
Thioredoxin reductase family
TR1	No selenocysteine	PVKE010016090.1	1925-28756 Strand +	89%	96%
TR2	Selenocysteine	PVKE010000238.1	79941-122550 Strand -	85%	90%
TR3	Selenocysteine	PVKE010034544.1 PVKE010031651.1 PVKE010019712.1	2115-16059 (-) 8026-15278 (-) 4243-6832 (+)	62%	67%

Protein	Residue	Scaffold	Gene location	Coverage type I	Coverage type II

eEFSec	No selenocysteine	PVKE010007345.1 PVKE010075947.1 PVKE010012895.1	2227-48794 (-) 2697-3056 (-) 32552-36780 (+)	68%	78%

SBP2	No selenocysteine	PVKE010008993.1 PVKE010037555.1	1458-6220 (+) 1410-15329 (-)	64%	83%

SecS	No selenocysteine	PVKE010021348.1 PVKE010024052.1	4683-24422 (+) 3155-13210 (+)	98%	99%

SecP43	No selenocysteine	PVKE010020672.1 PVKE010053199.1 PVKE010014577.1	23551-24166 (+) 547-9478 (+) 1094-3172 (+)	98%	99%

PSTK	No selenocysteine	PVKE010012691.1	19003-24832 Strand +	72%	87%

SPS2	Selenocysteine	PVKE010007810.1.1	26507-27847 Strand -	91%	99%

SPS1	No selenocysteine	PVKE010001866.1	50000-66938 Strand +	99%	100%