Scores Table 
      

SeqA Name                          Len(aa)  SeqB Name                          Len(aa)  Score
=============================================================================================
1    Proteina_14                   318      2    Macaca_mulatta_rhadinovirus   282      40   
1    Proteina_14                   318      3    Equine_herpesvirus_2          278      38   
1    Proteina_14                   318      4    Saimiriine_herpesvirus_2      282      35   
1    Proteina_14                   318      5    Ateline_herpesvirus_3         284      33   
1    Proteina_14                   318      6    Alcelaphine_herpesvirus_1     276      28   
1    Proteina_14                   318      7    Callitrichine_herpesvirus_3   270      33   
1    Proteina_14                   318      8    Bovine_herpesvirus_4          217      34   
1    Proteina_14                   318      9    Human_herpesvirus_4           246      30   
2    Macaca_mulatta_rhadinovirus   282      3    Equine_herpesvirus_2          278      40   
2    Macaca_mulatta_rhadinovirus   282      4    Saimiriine_herpesvirus_2      282      36   
2    Macaca_mulatta_rhadinovirus   282      5    Ateline_herpesvirus_3         284      34   
2    Macaca_mulatta_rhadinovirus   282      6    Alcelaphine_herpesvirus_1     276      33   
2    Macaca_mulatta_rhadinovirus   282      7    Callitrichine_herpesvirus_3   270      38   
2    Macaca_mulatta_rhadinovirus   282      8    Bovine_herpesvirus_4          217      41   
2    Macaca_mulatta_rhadinovirus   282      9    Human_herpesvirus_4           246      28   
3    Equine_herpesvirus_2          278      4    Saimiriine_herpesvirus_2      282      41   
3    Equine_herpesvirus_2          278      5    Ateline_herpesvirus_3         284      39   
3    Equine_herpesvirus_2          278      6    Alcelaphine_herpesvirus_1     276      37   
3    Equine_herpesvirus_2          278      7    Callitrichine_herpesvirus_3   270      34   
3    Equine_herpesvirus_2          278      8    Bovine_herpesvirus_4          217      42   
3    Equine_herpesvirus_2          278      9    Human_herpesvirus_4           246      32   
4    Saimiriine_herpesvirus_2      282      5    Ateline_herpesvirus_3         284      75   
4    Saimiriine_herpesvirus_2      282      6    Alcelaphine_herpesvirus_1     276      36   
4    Saimiriine_herpesvirus_2      282      7    Callitrichine_herpesvirus_3   270      30   
4    Saimiriine_herpesvirus_2      282      8    Bovine_herpesvirus_4          217      36   
4    Saimiriine_herpesvirus_2      282      9    Human_herpesvirus_4           246      28   
5    Ateline_herpesvirus_3         284      6    Alcelaphine_herpesvirus_1     276      34   
5    Ateline_herpesvirus_3         284      7    Callitrichine_herpesvirus_3   270      31   
5    Ateline_herpesvirus_3         284      8    Bovine_herpesvirus_4          217      35   
5    Ateline_herpesvirus_3         284      9    Human_herpesvirus_4           246      28   
6    Alcelaphine_herpesvirus_1     276      7    Callitrichine_herpesvirus_3   270      30   
6    Alcelaphine_herpesvirus_1     276      8    Bovine_herpesvirus_4          217      35   
6    Alcelaphine_herpesvirus_1     276      9    Human_herpesvirus_4           246      26   
7    Callitrichine_herpesvirus_3   270      8    Bovine_herpesvirus_4          217      34   
7    Callitrichine_herpesvirus_3   270      9    Human_herpesvirus_4           246      59   
8    Bovine_herpesvirus_4          217      9    Human_herpesvirus_4           246      34   
=============================================================================================

Alignment 
       

CLUSTAL W (1.82) multiple sequence alignment


Proteina_14                      MNNRRGSKPSIQRSAFASYIHSAMQSDSAPLPRVEYVFETSKFRMTSRAN 50
Macaca_mulatta_rhadinovirus      ---------------------------------VPYAFDSCKFEIIPKNN 17
Saimiriine_herpesvirus_2         ------------------------------VPEIYYRFEPQTFYITSPAR 20
Ateline_herpesvirus_3            ----------------------------AKVPVIYYKFKPQNFYITSSVG 22
Alcelaphine_herpesvirus_1        ----------------------------------------SVFTVTSNQE 10
Equine_herpesvirus_2             ---------------------------------IYYEFTSSSFEITSPPE 17
Bovine_herpesvirus_4             --------------------------------QVVYVKTESNFDTCLPDP 18
Callitrichine_herpesvirus_3      -------------------------------PCVNYAFSSDKFLILPATT 19
Human_herpesvirus_4              -------------------------------PHIRYAFQNDKLLLQQASV 19
                                  ..  .:..: . :: ::   :: .:.::  .          :       

Proteina_14                      EARLRLTNECPILVRPHEPFIMPTGIHFTR-TPSCAFILTGETDKDVFCH 99
Macaca_mulatta_rhadinovirus      SSRIALRNKFPVVVKPGEPLVVPLGLKIIR-APQCAFFLSGAPTDEVYYH 66
Saimiriine_herpesvirus_2         ASNLQLINHNNILVKAGQVTIVSTGIIFPK-ETSFAFILYGKSAKSIFCH 69
Ateline_herpesvirus_3            ASNLHLTNHTNILVKAGQVTIVNLGMSLAR-ETNFAFVLCGKSSKNIFCH 71
Alcelaphine_herpesvirus_1        ESTLQLVNNKPVVIEPFRSSVVPLGVYLRC-LPGYACMLLANTYRNVTFH 59
Equine_herpesvirus_2             SSKITLTNLYPILVRPYVPAVIPLGIRIIYGNKGQGFILAGSSQKKVFCH 67
Bovine_herpesvirus_4             PHRLCLTNKSQILVMPGVPNVVSLGVRIIN-PGTYAFLLHAWGNKKVFCH 67
Callitrichine_herpesvirus_3      --RLTLVNKTAILVRPFKTCILDLGLYAKP-PENHGLVLWGVTTRPVTPH 66
Human_herpesvirus_4              G-RLTLVNKTTILLRPMKTTTVDLGLYARP-PEGHGLMLWGSTSRPVTSH 67
                                    : * *   ::: .     :  *:         . .* .     :  *

Proteina_14                      TGLIDGGYRGEIQVILLNKRKYPVTLYRGELNICLSAFNYVLP-PLRDVS 148
Macaca_mulatta_rhadinovirus      TGLIDQGYRGEIKLIVLNKTKQVVTLYRGEVNVSLIAFMYASP-GPLKCP 115
Saimiriine_herpesvirus_2         TGLIDPGFQGELKLIVLNKTEDDITLFENDLRVSVTAFVYGVP-KLHDYS 118
Ateline_herpesvirus_3            TGLIDPGFQGEMKLIVLNKTESDIVLLENELRVSITAFVYGVP-KLHDYS 120
Alcelaphine_herpesvirus_1        PGLIDPTYMGELKLICNNRTDAYVVVPAGRLKVTVLAFTFLSP-ILTGPS 108
Equine_herpesvirus_2             TGLIDPGYRGEIKLIVLNTTKYNVTLFAGELRVSLFSFFFSTP-IIYDYD 116
Bovine_herpesvirus_4             IGLVDPGYKGDVRLILMNKTTRPVVIAARQLKVSLLAFCFAVPYVLPINC 117
Callitrichine_herpesvirus_3      TGIIDPGYTGMLKLILHNKRSVNSTLRPGELTVHLAAFKYHTPTDVPKGS 116
Human_herpesvirus_4              VGIIDPGYTGELRLILQNQRRYNSTLRPSELKIHLAAFRYATPQMEEDKG 117
                                  *::*  : * :::*  *      .:    : : : :* :  *       

Proteina_14                      FLTPPMYANDAGFDVMVMHSMVIPPTTDQPFMIYLGVETPGPPEPHVALA 198
Macaca_mulatta_rhadinovirus      ILNLPHYSLDAGFDVTSPHAMTIPPTDRTPFTLSLYYKSPQLSTPHVPLI 165
Saimiriine_herpesvirus_2         DLCPPRYSKDAGFDLYLPTDVTVKP--RVPNRYSVNICCPAQLKSYKPVL 166
Ateline_herpesvirus_3            DLCPPRYCKDAGFDLYLPTDIKVHP--GIPNKYSVNICCPAHIKSYKPIL 168
Alcelaphine_herpesvirus_1        VLSPPQYTDDAGYDLCLDQLVMVLP--LKAFTFQLALTCPIQSKNFTPVV 156
Equine_herpesvirus_2             LLNRPQYSDDAGYDLYLQEDLMLFP--QASTTVTIDSRVPTTTKFFKPVV 164
Bovine_herpesvirus_4             PITLPQYPLDAGLDITLPQNLSIPP--RTTAIVSISG-CPNISPKFIPVI 164
Callitrichine_herpesvirus_3      IINQPQYEKDVGLDVSCPSFVGIFP--QQTITIRLSGSPPKIP-HFRSMI 163
Human_herpesvirus_4              PINHPQYPGDVGLDVSLPKDLALFP--HQTVSVTLTVPPPSIP-HHRPTI 164
                                  :  * *  *.* *:     : : *:   .    :    *     . .  

Proteina_14                      LGRSGLASRGIVIDVSEWGPRGLQLKFYNYSGQPWLAQPGSRICQIVFVE 248
Macaca_mulatta_rhadinovirus      VGRSGLATKGLTVDATKWTQSLVHLRFYNFTKEPIDIPANSRICQVVFIH 215
Saimiriine_herpesvirus_2         FGRSGLAAKGLTIKVSRWQ-NQLQIIFYNYTKSQITYTARTRIAQVVFMH 215
Ateline_herpesvirus_3            FGRSGIAAKGLTIKVTRWE-NQLQIMFYNYTTSQKSYPARTRIAQVVFMH 217
Alcelaphine_herpesvirus_1        LGRSGLAAKGLSITPCKWKGDVLRLSMFNHTSETIILPEGSRLCQVVFMH 206
Equine_herpesvirus_2             FGRSGLATRGVVVDVVKWTHSPLTLKIYNFTDNTLRYSAGTRICQVVFVH 214
Bovine_herpesvirus_4             LGRSGMASKGLGVKAVKWQSSPVLIKITNYSDVTHTFTAGARICQVVFMH 214
Callitrichine_herpesvirus_3      FGRSGLACKGLIVRVTKWRRDGADVCITNYSAETVFLNEGDRCCQLVYLH 213
Human_herpesvirus_4              FGRSGLAMQGILVKPCRWRRGGVDVSLTNFSDQTVFLNKYRRFCQLVYLH 214
                                 .****:* :*: :   .*      : : *.:          * .*:*::.

Proteina_14                      RRHILKGFKKCLRHRKLAP---GVRFREARVHFREDTNSVRKHTHEDNPV 295
Macaca_mulatta_rhadinovirus      EDHVPSGWNILRSRVQLGS---TLQISWAKIRFTDVATLPKTHPLNSRHT 262
Saimiriine_herpesvirus_2         KKHLPTTLTRLKPTMHLSE---NIKYSWARVSFQDIK-TFPVQDEKLYSS 261
Ateline_herpesvirus_3            KRHLPRTFTRFKPTMHLSD---NIKYAWARVSFQDIN-VVCPSNIRTSST 263
Alcelaphine_herpesvirus_1        NDHLPTIKPRILAAFLFQHRLMDMPFCQSRVSFIDIQKDPCTSTSTLFQD 256
Equine_herpesvirus_2             RRHFPSKLKHFFTYINLNS---KTSFYWANVSFVDCQNDAYRSLVTLPCQ 261
Bovine_herpesvirus_4             SDH----------------------------------------------- 217
Callitrichine_herpesvirus_3      KEHLTSFFNPLCDTRCLGS---QFLFTWAKCIFREEADLLQKSAPR---- 256
Human_herpesvirus_4              KHHLTSFYSPHSDAGVLGP---RSLFRWASCTFEE--------------- 246
                                   *                         :     .               

Proteina_14                      HEPNVATASADIRGTKGLGSSGF 318
Macaca_mulatta_rhadinovirus      QS---QTEPETARGAKGLGSSGL 282
Saimiriine_herpesvirus_2         SK--DTSDSQMSRGDAGLGSSGL 282
Ateline_herpesvirus_3            NN--DTPDSQPVRGTAGLGSSGL 284
Alcelaphine_herpesvirus_1        ST--GNSISDATRGSKGLGSSG- 276
Equine_herpesvirus_2             ED--TDR---GYRGDSGFGSSG- 278
Bovine_herpesvirus_4             -----------------------
Callitrichine_herpesvirus_3      --------TGRDRSNKGFGSSG- 270
Human_herpesvirus_4              -----------------------
                                   ..    .    .  . .::. 




VOLVER