Score E
Sequences producing significant alignments: (bits) Value
gi|3551767|gb|AAC34946.1| unknown [Human herpesvirus 8] >gi... 719 0.0
gi|2246488|gb|AAB62613.1| ORF 50, EBV BRLF1 (R transactivat... 717 0.0
gi|18846017|ref|NP_572103.1| ORF 50; transactivator homolog... 702 0.0
gi|13506779|gb|AAK28330.1| immediate-early transcription fa... 137 7e-31
gi|18653857|ref|NP_570791.1| transactivator [Macaca mulatta... 134 7e-30
gi|7330040|gb|AAF60029.1| transactivator [Macaca mulatta rh... 134 8e-30
Alignments
>gi|3551767|gb|AAC34946.1| unknown [Human herpesvirus 8]
gi|4585183|gb|AAD25315.1| transcription activator ORF50 [Human herpesvirus 8]
gi|4585187|gb|AAD25318.1| transcription activator ORF50 [Human herpesvirus 8]
gi|4585191|gb|AAD25321.1| transcription activator ORF50 [Human herpesvirus 8]
Length = 691
Score = 719 bits (1856), Expect = 0.0
Identities = 421/522 (80%), Positives = 421/522 (80%)
Query: 1 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 60
MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI
Sbjct: 170 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 229
Query: 61 TGSAEKRRPITTGKVTGLSYPGSGXXXXXXXXXXXXXXXXXASMVDLSDVLAKPAVILSA 120
TGSAEKRRPITTGKVTGLSYPGSG ASMVDLSDVLAKPAVILSA
Sbjct: 230 TGSAEKRRPITTGKVTGLSYPGSGLMPESLILPILEPGLLPASMVDLSDVLAKPAVILSA 289
Query: 121 PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS 180
PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS
Sbjct: 290 PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS 349
Query: 181 QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN 240
QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN
Sbjct: 350 QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN 409
Query: 241 PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRAXXXXXXXXXXX 300
PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRA
Sbjct: 410 PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRAPVVQLPTVVPL 469
Query: 301 XXXXXXXXXXXXEASGEELPGGHDGDQGVPCRDSXXXXXXXXXXXPXXXXXXXXXXXXXX 360
EASGEELPGGHDGDQGVPCRDS P
Sbjct: 470 PASAFLPALAQPEASGEELPGGHDGDQGVPCRDSTAAATAAEATTPKRKQRSKERSSKKR 529
Query: 361 XALTVPEADXXXXXXXXXXXXXXXXXXQDVHATDVATSEGPSEAXXXXXXXXXXXXXXXX 420
ALTVPEAD QDVHATDVATSEGPSEA
Sbjct: 530 KALTVPEADTTPSTTTPGTSLGSITTPQDVHATDVATSEGPSEAQPPLLSLPPPLDVDQS 589
Query: 421 XFALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP 480
FALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP
Sbjct: 590 LFALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP 649
Query: 481 SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD 522
SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD
Sbjct: 650 SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD 691
>gi|2246488|gb|AAB62613.1| ORF 50, EBV BRLF1 (R transactivator) homolog, transcripts of
homologous genes usually spliced [Human herpesvirus 8]
Length = 685
Score = 717 bits (1852), Expect = 0.0
Identities = 421/522 (80%), Positives = 421/522 (80%)
Query: 1 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 60
MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI
Sbjct: 164 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 223
Query: 61 TGSAEKRRPITTGKVTGLSYPGSGXXXXXXXXXXXXXXXXXASMVDLSDVLAKPAVILSA 120
TGSAEKRRPITTGKVTGLSYPGSG ASMVDLSDVLAKPAVILSA
Sbjct: 224 TGSAEKRRPITTGKVTGLSYPGSGLMPESLILPILEPGLLPASMVDLSDVLAKPAVILSA 283
Query: 121 PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS 180
PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS
Sbjct: 284 PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS 343
Query: 181 QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN 240
QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN
Sbjct: 344 QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN 403
Query: 241 PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRAXXXXXXXXXXX 300
PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRA
Sbjct: 404 PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRAPVVQLPTVVPL 463
Query: 301 XXXXXXXXXXXXEASGEELPGGHDGDQGVPCRDSXXXXXXXXXXXPXXXXXXXXXXXXXX 360
EASGEELPGGHDGDQGVPCRDS P
Sbjct: 464 PASAFLPALAQPEASGEELPGGHDGDQGVPCRDSTAAATAAEATTPKRKQRSKERSSKKR 523
Query: 361 XALTVPEADXXXXXXXXXXXXXXXXXXQDVHATDVATSEGPSEAXXXXXXXXXXXXXXXX 420
ALTVPEAD QDVHATDVATSEGPSEA
Sbjct: 524 KALTVPEADTTPSTTTPGTSLGSITTPQDVHATDVATSEGPSEAQPPLLSLPPPLDVDQS 583
Query: 421 XFALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP 480
FALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP
Sbjct: 584 LFALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP 643
Query: 481 SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD 522
SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD
Sbjct: 644 SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD 685
>gi|18846017|ref|NP_572103.1| ORF 50; transactivator homolog; EBV BRLF1 homolog [Human
herpesvirus 8]
gi|1718303|gb|AAC57132.1| ORF 50; transactivator homolog; EBV BRLF1 homolog [Human
herpesvirus 8]
Length = 631
Score = 702 bits (1813), Expect = 0.0
Identities = 421/522 (80%), Positives = 421/522 (80%)
Query: 1 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 60
MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI
Sbjct: 110 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 169
Query: 61 TGSAEKRRPITTGKVTGLSYPGSGXXXXXXXXXXXXXXXXXASMVDLSDVLAKPAVILSA 120
TGSAEKRRPITTGKVTGLSYPGSG ASMVDLSDVLAKPAVILSA
Sbjct: 170 TGSAEKRRPITTGKVTGLSYPGSGLMPESLILPILEPGLLPASMVDLSDVLAKPAVILSA 229
Query: 121 PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS 180
PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS
Sbjct: 230 PALSQFVISKPHPNMPHTVSIIPFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGSS 289
Query: 181 QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN 240
QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN
Sbjct: 290 QTVSVKAVAQGAVITATTVPQAMPARGTGGELPVMSASTPARDQVAACFVAENTGDSPDN 349
Query: 241 PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRAXXXXXXXXXXX 300
PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRA
Sbjct: 350 PSSFLTSCHPCDPNTVIVAQQFQPPQCVTLLQVTCAPSSTPPPDSTVRAPVVQLPTVVPL 409
Query: 301 XXXXXXXXXXXXEASGEELPGGHDGDQGVPCRDSXXXXXXXXXXXPXXXXXXXXXXXXXX 360
EASGEELPGGHDGDQGVPCRDS P
Sbjct: 410 PASAFLPALAQPEASGEELPGGHDGDQGVPCRDSTAAATAAEATTPKRKQRSKERSSKKR 469
Query: 361 XALTVPEADXXXXXXXXXXXXXXXXXXQDVHATDVATSEGPSEAXXXXXXXXXXXXXXXX 420
ALTVPEAD QDVHATDVATSEGPSEA
Sbjct: 470 KALTVPEADTTPSTTTPGTSLGSITTPQDVHATDVATSEGPSEAQPPLLSLPPPLDVDQS 529
Query: 421 XFALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP 480
FALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP
Sbjct: 530 LFALLDEAGPETWDVGSPLSPTDDALLSSILQGLYQLDTPPPLRSPSPASFGPESPADIP 589
Query: 481 SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD 522
SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD
Sbjct: 590 SPSGGEYTQLQPVRATSATPANEVQESGTLYQLHQWRNYFRD 631
>gi|13506779|gb|AAK28330.1| immediate-early transcription factor RRta [Cercopithecine
herpesvirus 17]
Length = 577
Score = 137 bits (345), Expect = 7e-31
Identities = 79/182 (43%), Positives = 114/182 (62%), Gaps = 2/182 (1%)
Query: 1 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 60
M + S+L YNT D G L + +ALC LVFQP++L RI+AP++++ G++ P+N+++I
Sbjct: 172 MAIADSVLVTYNTLDAEGKLDLRLKALCKLVFQPIFLQRILAPMQLLANGKMVPDNYFTI 231
Query: 61 TGSAEKRRPITTGKVTGLSYPGSGXXXXXXXXXXXXXXXXXASMVDLSDVLAKPAVILSA 120
TG+AEKRRP+ TG +G++ PGS A +VDLS+VL P +ILSA
Sbjct: 232 TGTAEKRRPVVTGSTSGMTCPGSSLVPDSLILPVCEPGLLPAPLVDLSNVLENPEIILSA 291
Query: 121 PALSQFVISKPHPNMPHTVSII-PFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPA-TG 178
P LSQFVI+ HP++P +VSII P F+ TW+A SQ++ + T L A TG
Sbjct: 292 PPLSQFVITNTHPSLPQSVSIITPTQGVVPGQCFMDTWKAVSQSIHHQAQTPILAAALTG 351
Query: 179 SS 180
S+
Sbjct: 352 ST 353
>gi|18653857|ref|NP_570791.1| transactivator [Macaca mulatta rhadinovirus]
gi|4494955|gb|AAD21377.1| transactivator [Macaca mulatta rhadinovirus 17577]
Length = 514
Score = 134 bits (336), Expect = 7e-30
Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 60
M + S+L YNT D G L + +ALC LVFQP++L RI+AP++++ G++ P+N+++I
Sbjct: 109 MAIADSVLVTYNTLDAEGKLELRLKALCKLVFQPIFLQRILAPMQLLANGKMVPDNYFTI 168
Query: 61 TGSAEKRRPITTGKVTGLSYPGSGXXXXXXXXXXXXXXXXXASMVDLSDVLAKPAVILSA 120
TG+AEKRRP+ TG +G++ PGS A +VDLS+VL P +ILSA
Sbjct: 169 TGTAEKRRPVVTGSTSGMTCPGSSLVPDSLILPVCEPGLLPAPLVDLSNVLENPEIILSA 228
Query: 121 PALSQFVISKPHPNMPHTVSII-PFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGS 179
P LSQFVI+ HP++P +VSII P F+ TW+A SQ++ + T L A
Sbjct: 229 PPLSQFVITNTHPSLPQSVSIITPTQGVVPGQCFMDTWKAVSQSIHHQAQTPILAAALTG 288
Query: 180 SQTVS 184
S + +
Sbjct: 289 STSAA 293
>gi|7330040|gb|AAF60029.1| transactivator [Macaca mulatta rhadinovirus 26-95]
Length = 514
Score = 134 bits (336), Expect = 8e-30
Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MILTSSLLKLYNTYDTAGLLSEQSRALCLLVFQPVYLPRIMAPLEIMTKGQLAPENFYSI 60
M + S+L YNT D G L + +ALC LVFQP++L RI+AP++++ G++ P+N+++I
Sbjct: 109 MAIADSVLVTYNTLDAEGKLDLRLKALCKLVFQPIFLQRILAPMQLLANGKMVPDNYFTI 168
Query: 61 TGSAEKRRPITTGKVTGLSYPGSGXXXXXXXXXXXXXXXXXASMVDLSDVLAKPAVILSA 120
TG+AEKRRP+ TG +G++ PGS A +VDLS+VL P +ILSA
Sbjct: 169 TGTAEKRRPVVTGSTSGMTCPGSSLVPDSLILPVCEPGLLPAPLVDLSNVLENPEIILSA 228
Query: 121 PALSQFVISKPHPNMPHTVSII-PFNPSGTDPAFISTWQAASQNMVYNTSTAPLKPATGS 179
P LSQFVI+ HP++P +VSII P F+ TW+A SQ++ + T L A
Sbjct: 229 PPLSQFVITNTHPSLPQSVSIITPTQGVVPGQCFMDTWKAVSQSIHHQAQTPILAAALTG 288
Query: 180 SQTVS 184
S + +
Sbjct: 289 STSAA 293
VOLVER