Score E
Sequences producing significant alignments: (bits) Value
gi|18846022|ref|NP_572108.1| ORF 55; EBV BSRF1 homolog [Hum... 431 e-120
gi|18653861|ref|NP_570795.1| unknown [Macaca mulatta rhadin... 229 4e-59
gi|9628058|ref|NP_042652.1| ORF 55 [Equine herpesvirus 2] >... 189 6e-47
gi|24943141|ref|NP_733903.1| ORF49 [Callitrichine herpesvir... 184 1e-45
gi|18025485|gb|AAK95429.1| BSRF1 [cercopithicine herpesviru... 181 8e-45
gi|9625609|ref|NP_039860.1| Hypothetical protein [Human her... 179 6e-44
gi|30348559|emb|CAC84351.1| hypothetical protein [Saimiriin... 171 2e-41
gi|9626012|ref|NP_040257.1| ORF 55~EDLF1~sim. to EBV BSRF1 ... 171 2e-41
gi|10140977|ref|NP_065554.1| ORF55 [Alcelaphine herpesvirus... 170 2e-41
gi|9631246|ref|NP_048027.1| orf 55 [Ateline herpesvirus 3] ... 170 2e-41
gi|13095632|ref|NP_076547.1| unknown [Bovine herpesvirus 4]... 166 4e-40
gi|9629619|ref|NP_044892.1| unknown [murid herpesvirus 4] >... 152 5e-36
Alignments
>gi|18846022|ref|NP_572108.1| ORF 55; EBV BSRF1 homolog [Human herpesvirus 8]
gi|1718308|gb|AAC57137.1| ORF 55; EBV BSRF1 homolog [Human herpesvirus 8]
gi|2246524|gb|AAB62649.1| ORF 55, herpesvirus saimiri ORF 55 homolog, conserved in other
herpesviruses [Human herpesvirus 8]
Length = 227
Score = 431 bits (1109), Expect = e-120
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MSSPWYTWTCCGINLFGRGNHAYKRLGDPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLG 60
MSSPWYTWTCCGINLFGRGNHAYKRLGDPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLG
Sbjct: 1 MSSPWYTWTCCGINLFGRGNHAYKRLGDPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLG 60
Query: 61 TTALHQTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAV 120
TTALHQTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAV
Sbjct: 61 TTALHQTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAV 120
Query: 121 GEITVDDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPTSVLPLT 180
GEITVDDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPTSVLPLT
Sbjct: 121 GEITVDDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPTSVLPLT 180
Query: 181 PAVTRQPEATLPKPPTEDPSVSAMHSSIPPRPSSTLEETTESAIGST 227
PAVTRQPEATLPKPPTEDPSVSAMHSSIPPRPSSTLEETTESAIGST
Sbjct: 181 PAVTRQPEATLPKPPTEDPSVSAMHSSIPPRPSSTLEETTESAIGST 227
>gi|18653861|ref|NP_570795.1| unknown [Macaca mulatta rhadinovirus]
gi|4494959|gb|AAD21381.1| unknown [Macaca mulatta rhadinovirus 17577]
gi|7330044|gb|AAF60033.1| ORF55 [Macaca mulatta rhadinovirus 26-95]
Length = 210
Score = 229 bits (583), Expect = 4e-59
Identities = 115/191 (60%), Positives = 144/191 (75%)
Query: 1 MSSPWYTWTCCGINLFGRGNHAYKRLGDPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLG 60
M++P WTCCG + FGR Y+ L DPL CP WR EI +GLPPGV +GDV Q+ +
Sbjct: 1 MAAPGSFWTCCGFSPFGRVGCQYRPLPDPLNECPTHWRTEIAMGLPPGVDMGDVKQAEMC 60
Query: 61 TTALHQTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAV 120
T AL QTYLLAVQSNKIT+YL+RFD A++PAGCQETV+ Q+ KL+SIQNV+WN ML+LA+
Sbjct: 61 TAALRQTYLLAVQSNKITEYLRRFDAARVPAGCQETVRIQISKLKSIQNVIWNAMLSLAI 120
Query: 121 GEITVDDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPTSVLPLT 180
G+ITVD+SA +LLNKRA E VSL+EMEKLAT +ASDDSV WA+EI++ L + + +
Sbjct: 121 GDITVDESAFHALLNKRADETVSLLEMEKLATTIASDDSVTWAAEINNVLVDTEASSNPS 180
Query: 181 PAVTRQPEATL 191
V RQP L
Sbjct: 181 HPVIRQPTPQL 191
>gi|9628058|ref|NP_042652.1| ORF 55 [Equine herpesvirus 2]
gi|1360805|pir||S55650 hypothetical protein 55 - equine herpesvirus 2
gi|695228|gb|AAC13843.1| ORF 55
Length = 224
Score = 189 bits (479), Expect = 6e-47
Identities = 92/199 (46%), Positives = 134/199 (67%), Gaps = 8/199 (4%)
Query: 1 MSSPWYTWTCCGINLFGRGNHAYKRLGDPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLG 60
MSS W WTCCG+ FG+ + Y+++ + E ER R EID+GLPPGV +GD++Q+ G
Sbjct: 1 MSSRWIQWTCCGLWPFGKSSRQYRQIINVYEDDSERVRAEIDMGLPPGVSVGDLLQNRQG 60
Query: 61 TTALHQTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAV 120
A+ Q ++LA+QSN ITDYL+RFD ++P CQ V Q+ KL+S+Q+++WNTM+++AV
Sbjct: 61 EEAIRQAHMLALQSNAITDYLQRFDSVRVPESCQSIVSAQIAKLRSVQHIIWNTMISMAV 120
Query: 121 GEITVDDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPTSVLPLT 180
G +T+DDS L+ LLNK+AGE ++LMEMEKLA A+ D S WA I+ ++ P
Sbjct: 121 GNVTIDDSTLKVLLNKQAGESMALMEMEKLAAALKMDGSTDWAQNIASVVTAP------- 173
Query: 181 PAVTRQPEATLPKPPTEDP 199
P R+ + +P +DP
Sbjct: 174 PRAARE-QMAFREPIYDDP 191
>gi|24943141|ref|NP_733903.1| ORF49 [Callitrichine herpesvirus 3]
gi|13676692|gb|AAK38258.1| ORF49 [callitrichine herpesvirus 3]
Length = 219
Score = 184 bits (468), Expect = 1e-45
Identities = 96/204 (47%), Positives = 139/204 (68%), Gaps = 16/204 (7%)
Query: 8 WTCCGINLFGRGNHAYKRLGDPLEG--CPERWRQEIDLGLPPGVCLGDVVQSNLGTTALH 65
+TCCG+ LFGR N++Y R+ D +E CP+RWR EIDLGLPPGV +GD++++N L
Sbjct: 5 FTCCGLWLFGRHNNSYSRIIDNVEDFECPDRWRAEIDLGLPPGVQIGDLLRNNQSMNTLR 64
Query: 66 QTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITV 125
Q YLLAVQSN ITD+L RFD +P C+ V Q+ KLQ++++V+WN M++LAV + V
Sbjct: 65 QVYLLAVQSNSITDHLNRFDAVSVPESCKGVVNAQITKLQAVRSVIWNMMISLAVSGLAV 124
Query: 126 DDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEIS---HSLSEPT-SVLP--- 178
++ ++LL+K+AG+ ++LMEMEK+ATA+ +DD+ WA E+S S+++P V P
Sbjct: 125 EEEGFKALLDKQAGDSLALMEMEKMATALKTDDTGAWAQELSTFLASMAQPVIHVNPPDF 184
Query: 179 -----LTPAVTRQPEATLPK--PP 195
L A+T QPE P+ PP
Sbjct: 185 MGQPSLPTAITNQPERVEPRVSPP 208
>gi|18025485|gb|AAK95429.1| BSRF1 [cercopithicine herpesvirus 15]
Length = 221
Score = 181 bits (460), Expect = 8e-45
Identities = 100/213 (46%), Positives = 140/213 (65%), Gaps = 20/213 (9%)
Query: 8 WTCCGINLFGRGNHAYKRLGDPLEG--CPERWRQEIDLGLPPGVCLGDVVQSNLGTTALH 65
WTCCG+ LFGR Y +L + E CP+RWR EIDLGLPPGV +GD++++ +L
Sbjct: 8 WTCCGLWLFGRPRDRYHQLPEDPETFECPDRWRAEIDLGLPPGVQVGDLLRNEQTMGSLR 67
Query: 66 QTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITV 125
Q YLLAVQ+N ITD+LKRFD ++P C+ V+ QV KLQ++++V+WNTM++LAV I +
Sbjct: 68 QVYLLAVQANSITDHLKRFDAVRVPESCRGVVEAQVAKLQAVRSVIWNTMISLAVSGIEM 127
Query: 126 DDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPT----------- 174
D+S L++LL+K+AG+ ++LMEMEK+ATA+ D++ WA EIS +S T
Sbjct: 128 DESGLKALLDKQAGDSLALMEMEKVATALKMDETGAWAQEISAVVSSVTAPAATGAFLNP 187
Query: 175 ---SVLPLT----PAVTRQPEATLPKPPTEDPS 200
S +P T P V RQPE + P +PS
Sbjct: 188 THESEIPATVLAPPPVVRQPERSGPAELVVEPS 220
>gi|9625609|ref|NP_039860.1| Hypothetical protein [Human herpesvirus 4]
gi|141432|sp|P03194|UL71_EBV Protein BSRF1
gi|73969|pir||QQBE16 BSRF1 protein - human herpesvirus 4 (strain B95-8)
gi|1334863|emb|CAA24849.1| BSRF1 reading frame [Human herpesvirus 4]
gi|23893609|emb|CAD53413.1| BSRF1 protein [Human herpesvirus 4]
Length = 218
Score = 179 bits (453), Expect = 6e-44
Identities = 91/196 (46%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Query: 8 WTCCGINLFGRGNHAYKRLGDPLEG--CPERWRQEIDLGLPPGVCLGDVVQSNLGTTALH 65
W+CCG+ LFGR + Y +L + E CP+RWR EIDLGLPPGV +GD++++ +L
Sbjct: 8 WSCCGLWLFGRPRNRYSQLPEEPETFECPDRWRAEIDLGLPPGVQVGDLLRNEQTMGSLR 67
Query: 66 QTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITV 125
Q YLLAVQ+N ITD+LKRFD ++P C+ V+ QV KL+++++V+WNTM++LAV I +
Sbjct: 68 QVYLLAVQANSITDHLKRFDAVRVPESCRGVVEAQVAKLEAVRSVIWNTMISLAVSGIEM 127
Query: 126 DDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPTSVLPLTPAVTR 185
D++ L++LL+K+AG+ ++LMEMEK+ATA+ D++ WA EIS +S T+ P +
Sbjct: 128 DENGLKALLDKQAGDSLALMEMEKVATALKMDETGAWAQEISAVVSSVTAPSASAPFINS 187
Query: 186 QPEATLPKPPTEDPSV 201
E +P P P V
Sbjct: 188 AFEPEVPTPVLAPPPV 203
>gi|30348559|emb|CAC84351.1| hypothetical protein [Saimiriine herpesvirus 2]
Length = 200
Score = 171 bits (432), Expect = 2e-41
Identities = 86/177 (48%), Positives = 124/177 (70%), Gaps = 2/177 (1%)
Query: 28 DPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLGTTALHQTYLLAVQSNKITDYLKRFDVA 87
D CP+RW+ EI++ PPGV +GD++Q++ +L Q YLLAVQ N ITDYLKRFD A
Sbjct: 23 DTSSSCPDRWKIEIEIAQPPGVFVGDILQNSDSDASLRQAYLLAVQLNNITDYLKRFDEA 82
Query: 88 KIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITVDDSALQSLLNKRAGECVSLMEM 147
+P C+ V+TQ+ KL+S++N++WNTML++AVG +T+DD+AL++LL+KRAGE ++L+EM
Sbjct: 83 SVPESCKSVVQTQITKLKSVRNIIWNTMLSMAVGGVTIDDAALKTLLDKRAGESIALIEM 142
Query: 148 EKLATAMASDDSVIWASEISHSL--SEPTSVLPLTPAVTRQPEATLPKPPTEDPSVS 202
EKLATA+ DDS WA EI++ + +E + + V TL T P+VS
Sbjct: 143 EKLATAIVMDDSKAWAKEINNIILSAEHEKQILVNSEVPLIECETLAAEKTTTPAVS 199
>gi|9626012|ref|NP_040257.1| ORF 55~EDLF1~sim. to EBV BSRF1 [Saimiriine herpesvirus 2]
gi|267334|sp|Q01048|UL71_SHV21 Gene 55 protein
gi|73970|pir||QQBEP2 gene 55 protein - saimiriine herpesvirus 1 (strain 11)
gi|60377|emb|CAA45679.1| unnamed protein product [Saimiriine herpesvirus 2]
gi|330984|gb|AAA46132.1| first methionine codon in the EDLF1 ORF
Length = 200
Score = 171 bits (432), Expect = 2e-41
Identities = 86/177 (48%), Positives = 124/177 (70%), Gaps = 2/177 (1%)
Query: 28 DPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLGTTALHQTYLLAVQSNKITDYLKRFDVA 87
D CP+RW+ EI++ PPGV +GD++Q++ +L Q YLLAVQ N ITDYLKRFD A
Sbjct: 23 DTSSSCPDRWKIEIEIAQPPGVFVGDILQNSDSDASLRQAYLLAVQLNNITDYLKRFDEA 82
Query: 88 KIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITVDDSALQSLLNKRAGECVSLMEM 147
+P C+ V+TQ+ KL+S++N++WNTML++AVG +T+DD+AL++LL+KRAGE ++L+EM
Sbjct: 83 SVPESCKSVVQTQITKLKSVRNIIWNTMLSMAVGGVTIDDAALKTLLDKRAGESIALIEM 142
Query: 148 EKLATAMASDDSVIWASEISHSL--SEPTSVLPLTPAVTRQPEATLPKPPTEDPSVS 202
EKLATA+ DDS WA EI++ + +E + + V TL T P+VS
Sbjct: 143 EKLATAIVMDDSKAWAKEINNIILSAEHEKQILVNSEVPLIECETLAAEKTTTPAVS 199
>gi|10140977|ref|NP_065554.1| ORF55 [Alcelaphine herpesvirus 1]
gi|7444319|pir||T03150 hypothetical protein 55 - alcelaphine herpesvirus 1
gi|2338018|gb|AAC58102.1| ORF55 [Alcelaphine herpesvirus 1]
Length = 220
Score = 170 bits (431), Expect = 2e-41
Identities = 93/197 (47%), Positives = 134/197 (68%), Gaps = 5/197 (2%)
Query: 1 MSSPWYTWTCCGINLFGRGNHA-YKRL-GDPLEGCPERWRQEIDLGLPPGVCLGDVVQSN 58
M+S W WTCCG+ LFG+ Y +L +P C ER +QEI+ GLPPGV +GD++ +
Sbjct: 1 MASRWMEWTCCGLWLFGKPTQKKYTQLFEEPSYKCSERVKQEINKGLPPGVSVGDLILGD 60
Query: 59 LGTTALHQTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLAL 118
T AL+Q +LLA+QSN IT+YL RF+ A+IPA CQ V Q+ KL+++Q+V+WN M+++
Sbjct: 61 KSTEALNQAHLLALQSNNITEYLARFNAAEIPASCQGIVSNQIDKLKAMQSVIWNAMISI 120
Query: 119 AVGEITVDDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISH-SLSEPTSVL 177
A + + DS Q LL+K+A E ++LMEMEKLATA++ D++ WA EIS+ +++PT L
Sbjct: 121 ATSNVELSDSGFQLLLDKQACENMTLMEMEKLATAISVDNTTNWAREISNIIITQPTHAL 180
Query: 178 PLTPAVTRQPEATLPKP 194
P AV +PE P
Sbjct: 181 P--EAVPEKPEPIYDDP 195
>gi|9631246|ref|NP_048027.1| orf 55 [Ateline herpesvirus 3]
gi|11278273|pir||T42969 hypothetical protein 55 - ateline herpesvirus 3 (strain 73)
gi|4019282|gb|AAC95580.1| orf 55 [Ateline herpesvirus 3]
Length = 200
Score = 170 bits (430), Expect = 2e-41
Identities = 91/188 (48%), Positives = 125/188 (66%), Gaps = 4/188 (2%)
Query: 19 GNHAYKRLG--DPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLGTTALHQTYLLAVQSNK 76
G + YKR D CPERW+ EI++ PPGV +GD++QS +L Q YLLAVQ N
Sbjct: 12 GKYRYKRYVPLDTSSLCPERWKTEIEIAQPPGVFVGDILQSKDSEASLRQAYLLAVQLNN 71
Query: 77 ITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITVDDSALQSLLNK 136
ITDYLKRFD A +P C+ V TQ+ KL+S+++++WNTML++AVG +T+DD+AL++LL K
Sbjct: 72 ITDYLKRFDEANVPESCKSVVNTQITKLKSVRDIIWNTMLSMAVGGVTIDDAALKTLLEK 131
Query: 137 RAGECVSLMEMEKLATAMASDDSVIWASEISHSL--SEPTSVLPLTPAVTRQPEATLPKP 194
RAGE ++L+EMEKLATA+ DDS WA EI++ + +E L ++ LP P
Sbjct: 132 RAGESIALIEMEKLATAIVMDDSKSWAKEINNIILSAEHEKQGSLDSDLSPIQSQPLPSP 191
Query: 195 PTEDPSVS 202
T VS
Sbjct: 192 KTTKQLVS 199
>gi|13095632|ref|NP_076547.1| unknown [Bovine herpesvirus 4]
gi|12802582|gb|AAK07974.1| unknown [Bovine herpesvirus 4]
Length = 200
Score = 166 bits (419), Expect = 4e-40
Identities = 90/196 (45%), Positives = 131/196 (66%), Gaps = 8/196 (4%)
Query: 1 MSSPWYTWTCCGINLFGRGNHAYKRLGDPL-EGCPERWRQEIDLGLPPGVCLGDVVQSNL 59
M+ W W CC + G+ Y+++ D + E P RW +EI+LGLPPGV +GD++Q++
Sbjct: 1 MTWSWLQWLCC--SSLGK---KYEKVPDGVVEVYPTRWSKEIELGLPPGVNIGDLLQASD 55
Query: 60 GTTALHQTYLLAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALA 119
L+Q+YLLA+QSN I+DYL RFD KIP GCQ V Q+ KL+S+QN++WNTM+++A
Sbjct: 56 CQETLYQSYLLAIQSNNISDYLMRFDSVKIPDGCQGVVSAQIAKLKSVQNIIWNTMISMA 115
Query: 120 VGEITVDDSALQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSL--SEPTSVL 177
VG IT+DD+A+++LL +RAG+ ++LMEMEKLA A+ D + WA +I L + PT
Sbjct: 116 VGSITIDDAAVETLLERRAGDTMALMEMEKLANAIKMDVTQEWAGDIDKLLVNAPPTPNG 175
Query: 178 PLTPAVTRQPEATLPK 193
P + E + PK
Sbjct: 176 PPKLYGEKGVEVSQPK 191
>gi|9629619|ref|NP_044892.1| unknown [murid herpesvirus 4]
gi|1850855|emb|CAA70271.1| hypothetical protein [Murid herpesvirus 4]
gi|2317989|gb|AAB66447.1| unknown [murid herpesvirus 4]
gi|6625618|gb|AAF19319.1| 55 [murid herpesvirus 4]
Length = 190
Score = 152 bits (384), Expect = 5e-36
Identities = 84/198 (42%), Positives = 126/198 (63%), Gaps = 18/198 (9%)
Query: 10 CCGINLFGRGNHAYKRLGDPLEGCPERWRQEIDLGLPPGVCLGDVVQSNLGTTALHQTYL 69
CCGI FG+ YKRL D ER EI LG+PPGV D+++S L Q YL
Sbjct: 3 CCGIWPFGKPGVPYKRLADV--ETDERMEMEIRLGMPPGVLAADLIRSTKDKQVLEQLYL 60
Query: 70 LAVQSNKITDYLKRFDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITVDDSA 129
LAVQ+N +T+++KRF + +IP C+ ++Q++KL+S+Q+++WNTM++LA G I+VD++
Sbjct: 61 LAVQANNLTEHIKRFTLGEIPEECKNVTRSQLEKLKSVQHIIWNTMISLAAGAISVDEAT 120
Query: 130 LQSLLNKRAGECVSLMEMEKLATAMASDDSVIWASEISHSLSEPTSVLPLTPAVTRQPEA 189
L +LL+KRA E V+L+EMEK+ATA+ D++ WA++I+ V+ QP A
Sbjct: 121 LPALLDKRAEETVALLEMEKIATAVKLDETAAWATDIAG-------------IVSSQPLA 167
Query: 190 TLPKPPTEDPSVSAMHSS 207
T PP+E P A+ +
Sbjct: 168 T---PPSESPDQIALKKA 182
VOLVER