genewise output
Score 171.40 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000128_2.0    1 MSGEPGQTSVAPPPEEVEPGSGVRIVVEY                     
                     MSG+ G  S AP   E+EPGSGVRIVVEY                     
                     MSGDVGPMSAAPHRGEIEPGSGVRIVVEY                     
gi|411115860|-100857 aaggggcatggcccggagcgaggcagggt                     
                     tggatgctccccaggatacgggtgtttaa                     
                     gcgcgtggtagctcggcagccgcccgggc                     


SPP00000128_2.0   30                           EPCGFEATYLELASAVKEQYPGI 
                                               EPCGFEATYLELASAVKEQYPGI 
                                C:C[tgt]       EPCGFEATYLELASAVKEQYPGI 
gi|411115860|-100770 TGGTGAGCG  Intron 1   TAGTgctgtggatcgcgaggagctcga 
                       <2-----[100768:10066-2> acggtaccatatcgctaaaacgt 
                                               accctggccggggccggggctcc 


SPP00000128_2.0   54 EIESRLGGT                          AFEIEINGQLVFSK 
                     EIESRLGGT                          AFEIEINGQLVFSK 
                     EIESRLGGT          G:G[ggg]        AFEIEINGQLVFSK 
gi|411115860|-100593 gagtccggaGGTGAGGC  Intron 2   CAGGGgtgagaagccgtta 
                     atacgtggc <1-----[100565:10014-1>  ctatatagatttca 
                     gcggcggca                          ctgcgctagggccg 


SPP00000128_2.0   78 LENGGFPYEKDVSIYSVGRT                              
                     LENGGFPYEKDVSI +VG T                              
                     LENGGFPYEKDVSICNVGST                              
gi|411115860|-100104 cgaggtctgaggaataggaa                              
                     taaggtcaaaatgtgatggc                              
                     ggtgcctcgatgttcttgcc                              


//
Making a C in phase 2 intron
Making a G in phase 1 intron
>gi|411115860|gb|JH977703.1|:subseq(4769982,200857).pep
MSGDVGPMSAAPHRGEIEPGSGVRIVVEYCEPCGFEATYLELASAVKEQYPGIEIESRLG
GTGAFEIEINGQLVFSKLENGGFPYEKDVSICNVGST
//
>gi|411115860|gb|JH977703.1|:subseq(4769982,200857).[100857:100043].sp
ATGAGCGGGGACGTGGGTCCGATGTCTGCAGCGCCCCATCGCGGGGAGATCGAACCGGGC
AGCGGGGTCCGCATCGTGGTGGAGTACTGTGAACCCTGCGGCTTTGAGGCGACCTACCTG
GAGCTGGCGAGCGCCGTGAAGGAGCAGTACCCTGGCATCGAGATCGAGTCGCGCCTGGGG
GGCACAGGGGCCTTTGAGATCGAGATCAATGGACAGCTGGTGTTCTCCAAGCTGGAGAAT
GGGGGCTTCCCTTACGAGAAAGATGTGAGTATTTGCAATGTTGGGAGCACC
//
gi|411115860|gb|JH977703.1|:subseq(4769982,200857)	GeneWise	match	100857	100045	171.40	-	.	gi|411115860|gb|JH977703.1|:subseq(4769982,200857)-genewise-prediction-1
gi|411115860|gb|JH977703.1|:subseq(4769982,200857)	GeneWise	cds	100857	100769	0.00	-	0	gi|411115860|gb|JH977703.1|:subseq(4769982,200857)-genewise-prediction-1
gi|411115860|gb|JH977703.1|:subseq(4769982,200857)	GeneWise	intron	100768	100664	0.00	-	.	gi|411115860|gb|JH977703.1|:subseq(4769982,200857)-genewise-prediction-1
gi|411115860|gb|JH977703.1|:subseq(4769982,200857)	GeneWise	cds	100663	100566	0.00	-	1	gi|411115860|gb|JH977703.1|:subseq(4769982,200857)-genewise-prediction-1
gi|411115860|gb|JH977703.1|:subseq(4769982,200857)	GeneWise	intron	100565	100149	0.00	-	.	gi|411115860|gb|JH977703.1|:subseq(4769982,200857)-genewise-prediction-1
gi|411115860|gb|JH977703.1|:subseq(4769982,200857)	GeneWise	cds	100148	100045	0.00	-	2	gi|411115860|gb|JH977703.1|:subseq(4769982,200857)-genewise-prediction-1
//