geneid predictions on sequence submitted from basileia.imim.es are: |
## date Fri Nov 21 11:52:58 2003
## source-version: geneid v 1.1 -- geneid@imim.es
# Sequence HS307871 - Length = 4514 bps
# Optimal Gene Structure. 2 genes. Score = 16.648019
# Gene 1 (Reverse). 1 exons. 25 aa. Score = 1.632639
First 72 145 1.63 - 0 2 3.65 6.41 1.49 0.00 AA 1: 25 HS307871_1
>HS307871_1|geneid_v1.1_predicted_protein_1|25_AA
MAGPWPGAVLESPRQLLGRCASWQag
# Gene 2 (Forward). 9 exons. 350 aa. Score = 15.015380
First 1833 1860 -1.30 + 0 1 0.16 5.38 0.94 0.00 AA 1: 10 HS307871_2
Internal 1976 2055 0.24 + 2 0 4.17 4.71 -0.22 0.00 AA 10: 36 HS307871_2
Internal 2132 2194 0.44 + 0 0 4.23 0.58 6.38 0.00 AA 37: 57 HS307871_2
Internal 2434 2682 4.66 + 0 0 5.09 0.16 16.28 0.00 AA 58:140 HS307871_2
Internal 2749 2910 3.19 + 0 0 4.65 5.34 5.50 0.00 AA 141:194 HS307871_2
Internal 3279 3416 0.97 + 0 0 1.52 3.24 7.80 0.00 AA 195:240 HS307871_2
Internal 3576 3676 3.23 + 0 2 2.70 3.95 10.61 0.00 AA 241:274 HS307871_2
Internal 3780 3846 -0.96 + 1 0 2.83 1.86 3.06 0.00 AA 274:296 HS307871_2
Terminal 4179 4340 4.55 + 0 0 2.65 0.00 19.89 0.00 AA 297:350 HS307871_2
>HS307871_2|geneid_v1.1_predicted_protein_2|350_AA
MRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFLLDAAIIFSDILVVPQALG
MEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFA
GAPVMWDRAGTRGAGRSLWKWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDA
LVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPM
IIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIG
QLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQN*
Species:
Homo sapiens
Command:
geneid -P human.param geneid20944basileia.imim.es.fasta
Running time:
0.64 secs
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