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FGENESH 2.0 Prediction of potential genes in Homo_sapiens genomic DNA Time : Fri Nov 21 07:07:47 2003 Seq name: HS307871 Length of sequence: 4514 Number of predicted genes 1 in +chain 1 in -chain 0 Number of predicted exons 10 in +chain 10 in -chain 0 Positions of predicted genes and exons: G Str Feature Start End Score ORF Len 1 + 1 CDSf 144 - 214 1.65 144 - 212 69 1 + 2 CDSi 1748 - 1860 4.88 1749 - 1859 111 1 + 3 CDSi 1976 - 2055 6.13 1978 - 2055 78 1 + 4 CDSi 2132 - 2194 6.46 2132 - 2194 63 1 + 5 CDSi 2434 - 2682 2.94 2434 - 2682 249 1 + 6 CDSi 2749 - 2910 10.64 2749 - 2910 162 1 + 7 CDSi 3324 - 3416 7.44 3324 - 3416 93 1 + 8 CDSi 3576 - 3676 11.26 3576 - 3674 99 1 + 9 CDSi 3780 - 3846 0.13 3781 - 3846 66 1 + 10 CDSl 4179 - 4340 14.60 4179 - 4340 162 1 + PolA 4397 1.13 Predicted protein(s): >FGENESH:[mRNA] 1 10 exon (s) 144 - 4340 1161 bp, chain + atgagtcagctggcgcgaccgcggacagagcttcccaccacgcccttccccgcctttggc cagcctttgccacctcagggttttccggagctgaagaatgacacattcctgcgagcagcc tggggagaggaaacagactacactcccgtttggtgcatgcgccaggcaggccgttactta ccagagtttagggaaacccgggctgcccaggactttttcagcacgtgtcgctctcctgag gcctgctgtgaactgactctgcagccactgcgtcgcttccttctggatgctgccatcatt ttctccgacatccttgttgtaccccaggcactgggcatggaggtgaccatggtacctggc aaaggacccagcttcccagagccattaagagaagagcaggacctagaacgcctacgggat ccagaagtggtagcctctgagctaggctatgtgttccaagccatcacccttacccgacaa cgactggctggacgtgtgccgctgattggctttgctggtgccccagtaatgtgggacagg gcagggactcggggcgcggggagatcactctggaagtggaccctgatgacatacatggtt gagggtggtggctcaagcaccatggctcaggccaagcgctggctctatcagagacctcag gctagtcaccagctgcttcgcatcctcactgatgctctggtcccatatctggtaggacaa gtggtggctggtgcccagctcttcaacaagtttgcactgccttacatccgtgatgtggcc aagcaagtgaaggccaggttgcgggaggcaggcctggcaccagtgcccatgatcatcttt gctaaggatgggcattttgccctggaggagctggcccaagctggctatgaggtggttggg cttgactggacagtggccccaaagaaagcccgggagtgtgtggggaagacggtgacattg cagggcaacctggacccctgtgccttgtatgcatctgaggaggagatcgggcagttggtg aagcagatgctggatgactttggaccacatcgctacattgccaacttgggccatgggctt tatcctgacatggacccagaacatgtgggcgcctttgtggatgctgtgcataaacactca cgtctgcttcgacagaactga >FGENESH: 1 10 exon (s) 144 - 4340 386 aa, chain + MSQLARPRTELPTTPFPAFGQPLPPQGFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYL PEFRETRAAQDFFSTCRSPEACCELTLQPLRRFLLDAAIIFSDILVVPQALGMEVTMVPG KGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPVMWDR AGTRGAGRSLWKWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQ VVAGAQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVG LDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGL YPDMDPEHVGAFVDAVHKHSRLLRQN

 


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