------- SECIS element -- id:1 -- grade:B ----
 Chromosome = JACSYO010002009.1:subseq_657478,100000_ Strand = - Positions = 25285 - 25201
 Found by:  Infernal (score=14.49) Covels (score=7.0)
 Stem2 length = 11   Apical loop length = 18   Insertion in stem2 = 1, 0
 Free Energy = -5.04

         ..(((((((...........((((((((((.(((((..................))))))))))))))).........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccug-gcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ..(({((((...........([[[([((((.(((((..................)))))))))])]]]).....-.-.))))}))..
 target  UGAGAUGUGGCUCAGCUGUUUGAAGAGUUUAAUUGGAAAGCAUUUGGAAAGUACCCGAUAAAUGCGGAACUUAC-A-GCGCAACUGU
                             ****            ^^^                          ****                  

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JACSYO010002009.1:subseq_657478,100000_ Strand = + Positions = 64901 - 64973
 Found by:  Infernal (score=11.52) Covels (score=3.05)
 Stem2 length = 8   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -9.86

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(((((((.......([[(((([({{(((......---........)))}})]))))]])..--....)))))))..
 target  UUGAGAAGGGCAGAAAUGAUGUCAUCAUUUAAAGCA---GGAGCCCCGAGCCAGGACGGAGGC--CUCGCCUUUUCCU
                         ****          ^^^                        ****                 

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = JACSYO010002009.1:subseq_657478,100000_ Strand = - Positions = 98771 - 98701
 Found by:  Infernal (score=11.48) Covels (score=2.45)
 Stem2 length = 8   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -6.76

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(((((((.......([[(((((((({(..........-----....)}))))))))]])..--....)))))))..
 target  CAGGAAAUACAAUCUGUGAUAUGAUCUUUAUAAAGCCGG-----GGCCGUGGGUCGUAGAGGU--CCGCUAUUUUUAC
                         ****           ^^^                       ****