------- SECIS element -- id:1 -- grade:B ---- Chromosome = JACSYO010000096.1:subseq_160120,100000_ Strand = + Positions = 55892 - 55972 Found by: Infernal (score=13.32) Covels (score=13.59) Stem2 length = 10 Apical loop length = 15 Insertion in stem2 = 2, 1 Free Energy = -4.42 ..(((((((.......((((((((((((..(((...............))))))).))))))))...........))))))).. model uucggucaugcgUuaAUGAcGgccuggc--ccuAAAcCcuuuuuggggcgggcca-ggcCuGAUGuu--u-uuucaugaccggc .({({(((((......([[{((((((((..((......--.........)))))).))))}]]).......-..)))))})}). target UGUGAAGCGGCGGGGAUGAGGGUUAGCACCUCCAAAUC--UGAGGCCAUGGUGCUCAGCCGGAAACCGGUG-GAUUGCUCCCUC **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JACSYO010000096.1:subseq_160120,100000_ Strand = + Positions = 43469 - 43536 Found by: Infernal (score=11.15) Covels (score=11.29) Stem2 length = 10 Apical loop length = 9 Insertion in stem2 = 0, 0 Free Energy = -13.1 ..(((((((.......(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ..((((([((--(((.([[{((((((((((......--------...))))))))))}]])....)-))))]))))).. target CCCGGAUAAG--CGGAUGACAAUGGAUGGAACAACU--------UUCUUCAUUUAUUAGAAAGAAU-UGUUGAUCUGUU **** ^^ ****