------- SECIS element -- id:1 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 26864 - 26797 Found by: Infernal (score=13.61) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((((((....([[{(((((((((.------............)))))))))}]])----.))))))))))). target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGA **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 28451 - 28384 Found by: Infernal (score=13.61) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((((((....([[{(((((((((.------............)))))))))}]])----.))))))))))). target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGA **** **** ------- SECIS element -- id:3 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 32003 - 31936 Found by: Infernal (score=13.61) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((((((....([[{(((((((((.------............)))))))))}]])----.))))))))))). target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGA **** **** ------- SECIS element -- id:4 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 21932 - 21865 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:5 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 22529 - 22462 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:6 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 22979 - 22912 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:7 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 23429 - 23362 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:8 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 23879 - 23812 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:9 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 24767 - 24700 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:10 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 35972 - 35905 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:11 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 36422 - 36355 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:12 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751287,100000_ Strand = - Positions = 22190 - 22123 Found by: Infernal (score=11.58) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -20.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((({((((....([[{(((((((((.------............)))))))))}]])----.))))})))))). target ACAACAGAUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCACUUGUUGA **** ****