------- SECIS element -- id:1 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 26867 - 26800 Found by: Infernal (score=13.61) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((((((....([[{(((((((((.------............)))))))))}]])----.))))))))))). target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGA **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 28454 - 28387 Found by: Infernal (score=13.61) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((((((....([[{(((((((((.------............)))))))))}]])----.))))))))))). target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGA **** **** ------- SECIS element -- id:3 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 32006 - 31939 Found by: Infernal (score=13.61) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((((((....([[{(((((((((.------............)))))))))}]])----.))))))))))). target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGA **** **** ------- SECIS element -- id:4 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 21935 - 21868 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:5 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 22532 - 22465 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:6 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 22982 - 22915 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:7 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 23432 - 23365 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:8 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 23882 - 23815 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:9 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 24770 - 24703 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:10 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 35975 - 35908 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:11 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 36425 - 36358 Found by: Infernal (score=12.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.92 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((((((((((....([[{(((((((((.------............)))))))))}]])----.)))))))))))) target GCAACAGUUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCAGUUGUUGU **** **** ------- SECIS element -- id:12 -- grade:B ---- Chromosome = JACSYO010002134.1:subseq_751284,100000_ Strand = - Positions = 22193 - 22126 Found by: Infernal (score=11.58) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -20.22 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((({((((....([[{(((((((((.------............)))))))))}]])----.))))})))))). target ACAACAGAUGCUGUUGUGACGGCAAUUGUU------GUUGUUGGGGCCACAGUUGUUUGAG----AAGCACUUGUUGA **** ****