_________________________________.______________________._________________________________________________________________________________ _|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| | knownSP | secis_index:1 SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_ _________________________________|______________________|_________________________________________________________________________________ Blastx evalue: 7e-31 Query name: gi|966002158|ref|XP_004020759.2| PREDICTED: methionine-R-sulfoxide reductase B1 [Ovis aries] Query range: 1-115 (total 115) Target: /data/www-rg/seblastian_results/6161340/tempfiles/temptarget.fasta Chromosome: JAHTZZ010000044.1:subseq_1280836,100155_ Strand: + Positions: -Exon 1 48251 48305 -Exon 2 50004 50152 -Exon 3 50466 50580 -Exon 4 51878 51906 Redox box: no Query MSFCSFFGGEIFQNHFEPG <---Intron---> IYVCAKCGYELFSSRSKYAHSSPWPTFTETIHADSVAKRPEHNRPGAIK <---Intron---> ||||||||||||||||||| < 1698bp > ||||||||||||||||||||||||||||||||||||||||||||||||| < 313bp > Target MSFCSFFGGEIFQNHFEPG IYVCAKCGYELFSSRSKYAHSSPWPTFTETIHADSVAKRPEHNRPGAIK atttattgggatcactgcg atgtgatgtgcttactatgcttctcatagaacggaggaccgcaccggaa tctggttggattaaatac gtatgcaggaattcggcaacacccgcctcactacagtcagcaaagcgcta ggcccctgcgtcgcctgg tccgtcgtctgccccccgcacacggggccgtcttctgcggagctgtacag Query VSCGRCGNGLGHA-RTEAPKRGQSRFUIFSSSLKFIPKG <---Intron---> EETSASQGQ |||||||||||| / ||||||||||||||||||||| < 1297bp > ||||||||| Target VSCGRCGNGLGHEFLNDGPKRGQSRFUIFSSSLKFIPKG EETSASQGQ gttgatgagcgcgtcaggcacgctcttataattatacag ggatgtcgc tcgggggagtgaattaagcaggacgtgttggctattca gaaccccaga actcgtccggctgcgctccgtagcccatcccaggccta taaccccgag * Sequence until next stop: TAG * Distance CDS-SECIS: 441 ; UGA-SECIS: 504