_________________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:1     SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

 Blastx evalue: 0.0
 Query name: gi|942053820|ref|XP_014333626.1| PREDICTED: thyroxine 5-deiodinase [Bos mutus]
 Query range: 1-301  (total 301)

 Target: /data/www-rg/seblastian_results/318154151/tempfiles/temptarget.fasta
 Chromosome: JAHTZZ010000001.1:subseq_179049467,99224_ Strand: +
 Positions:
 -Exon 1  49119        50021

 Redox box: no

Query   MSRQAAPRWVVGEGRGALGGAATMLRSLLLHSLRLCSQTASCLVLFPRFLGTAFMLWLLDFLCIRKHLLGRRRRGQPEIEVELNSDGEEVPPDDPPVCVS
        | ||||||||||||||||||||||||||||||||||/||||||||||||||||||||||||||||||||||||||||||||||||/||||||||||||||
Target  MPRQAAPRWVVGEGRGALGGAATMLRSLLLHSLRLCAQTASCLVLFPRFLGTAFMLWLLDFLCIRKHLLGRRRRGQPEIEVELNSEGEEVPPDDPPVCVS
        acccggcctgggggaggcggggaacctcccctcactgcagttcgctcctcgagtactccgtctacactcgccccgccgagggcaagggggccggccgtgt
        tcgacccggttgagggctggcccttgctttactgtgcacccgttttcgttgcctttgttattgtgaattggggggacatatatagagaatccaacctgtc
        gtcgccggggggatggtggccccggccggtctggcccggcgccgccgccgcgccgcggtccccccgtagctacgtggacaggcccgcaggccccgtccgc
                                                                                                            

Query   DDNRLCTLASLRAVWHGQKLDFFKQAHEGGPAPNSEVVLPDGFQNQHILDYARGNRPLVLNFGSCTUPPFMARMSAFQRLVTKYQRDVDFLIIYIEEAHP
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Target  DDNRLCTLASLRAVWHGQKLDFFKQAHEGGPAPNSEVVLPDGFQNQHILDYARGNRPLVLNFGSCTUPPFMARMSAFQRLVTKYQRDVDFLIIYIEEAHP
        ggacctatgtcaggtcgcatgttacgcgggcgcatgggccggtcaccacgtgcgacccgcatgatatcctagcaagtcccgaatccgggtcaatagggcc
        aaagtgctcctgctgagaatattaacaaggcccacatttcagtaaaattaacggagctttatgggcgccttcgtgctagttcaaagatattttataacac
        ccccgccgggggccgccgggtccgggtacgggcctggcgacccgcgcccctcaaccgggcccccccaagcggcgcccgcgccgtgccccccccccgagct
                                                                          *                                 

Query   SDGWVTTDSPYSIPQHRSLEDRVSAARVLQQGAPECALVLDTMTNSSSSAYGAYFERLYIIQSGTIMYQGGRGPDGYQVSEVRTWLERYDEQLHGPQPRR
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||/||||||||||||||||||
Target  SDGWVTTDSPYSIPQHRSLEDRVSAARVLQQGAPECALVLDTMTNSSSSAYGAYFERLYIIQSGTIMYQGGRGPDGYQVSELRTWLERYDEQLHGPQPRR
        tggtgaagtctaaccccacggcgaggcgcccggcgtgcgcgaaaataatgtggttgcctaacagaaatcggcgcggtcgtgccatcgctggcccgccccc
        caggtccaccagtcaaggtaagtgccgttaagccagctttactcacggccagcatagtattaggcttaaggggcagaatcatgcgtagaaaatagcacgg
        cccgccactccctggcacggcgcccgcaggagtgactcgccggcccccgccccccgcccccgtcctgcgccccccccgccggccgggcttgggccggtta
                                                                                                            

Query   V
        |
Target  V
        g
        t
        g
         
 Sequence until next stop: 
TAA
 *