------- SECIS element -- id:1 -- grade:A ----
 Chromosome = your_sequence Strand = + Positions = 52793 - 52880
 Found by:  Infernal (score=23.84) Covels (score=32.4)
 Stem2 length = 11   Apical loop length = 17   Insertion in stem2 = 0, 0
 Free Energy = -6.43

         ..(((((((.............(((((((((((((((.................)))))))))))))))...........)))))))..
 model   uucggucaugcg------UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         .({([((((.............([[((((((((((((.................))))))))))))]]).......-...))))])}).
 target  UUCUGUGAUAGGAGCAGAUCAAUGAAGUUGUACUGGGAACUCCUUCCUCAAGGAUCCGGUGUAACUGAACCACAGU-UUCAUUAAAUAC
                               ****           ^^                          ****                    

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = your_sequence Strand = + Positions = 70995 - 71072
 Found by:  Infernal (score=19.99) Covels (score=10.52)
 Stem2 length = 9   Apical loop length = 23   Insertion in stem2 = 0, 0
 Free Energy = -11.2

         ..(((((((.......(((((((((((((((...................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..({(((([(......([[((((((((((.......................))))))))))]])----...)]))))})..
 target  UCAAGAUCAGUUUUGUUGAAGAAAGUCUUGAAAACCCAGUUACACAUGAUCAAAGACUUUCUGAA----UACUGGAUCAUUU
                         ****          ^^^                            ****                 

------- SECIS element -- id:3 -- grade:C ----
 Chromosome = your_sequence Strand = + Positions = 115794 - 115885
 Found by:  Infernal (score=14.46) Covels (score=10.06)
 Stem2 length = 7   Apical loop length = 19   Insertion in stem2 = 0, 0
 Free Energy = -9.24

         ..(((((((......................(((((((((((((((.................)))))))))))))))........)))))))..
 model   uucggucaugcg---------------UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .((((((((......................{[[{{{((({((((...................))))})))}}}]]}..--..-.)))))))).
 target  UUUUCUGCUCUGCCUUUUUUUUGAAGAUUAAUGACUCCAUCACUGGAAUCUAACCAGAGUCAGGCAGUUGUGUUUGAUAU--CA-CAGCAGGAGC
                                        ****           ^^                          ****