------- SECIS element -- id:1 -- grade:B ---- Chromosome = your_sequence Strand = - Positions = 149233 - 149155 Found by: Infernal (score=11.88) Covels (score=10.97) Stem2 length = 10 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -5.63 ..(((((((.......(((((((((((((((.................)))))))))))))))...........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc .((({({((---((..{[[((((({([((((.................))))])})))))]]}.......-.))))})}))). target ACAAAUAGA---UAAUUGAGGGGAAGAAAGGAAAAUAAUUACAUCCAGUCUUGCCUUCUUGAUGUUCAAC-AUGUCAACUUGG **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = your_sequence Strand = - Positions = 111628 - 111562 Found by: Infernal (score=10.74) Covels (score=10.46) Stem2 length = 7 Apical loop length = 10 Insertion in stem2 = 0, 0 Free Energy = -9.8 ..(((((((.........(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcg--UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ....((((((........([[((({{(((((........---------..)))))}})))]])..--.--)))))).... target UACAGUUUCUGAGACUCAUGAAGACUAAGAGCCAAACCA---------UCCUUUUCAUCUGAAGA--A--AGAGACAUCA **** ^^^ ****