------- SECIS element -- id:1 -- grade:B ---- Chromosome = JAGGNJ010017168.1:subseq_3982272,150000_ Strand = + Positions = 51050 - 51130 Found by: Infernal (score=31.53) Covels (score=12.65) Stem2 length = 10 Apical loop length = 23 Insertion in stem2 = 0, 1 Free Energy = -13.2 ..(((((((.......(((((((((((((((.....................)))))))).)))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC------cuuuuuggggcgggccag-gcCuGAUGuuuuuucaugaccggc (((((((((.--....{[[{((((((((((.......................))))))).)))}]]}..--....))))))))) target CUAGUAUUUC--UUUGUGAUGACCGAUUUUGAAAUGGGUUUCUCUAAUGCCAGGAAAUCGCGUCUGAUGU--UGUCAAAUACUAG **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JAGGNJ010017168.1:subseq_3982272,150000_ Strand = - Positions = 16166 - 16082 Found by: Infernal (score=10.58) Stem2 length = 10 Apical loop length = 16 Insertion in stem2 = 0, 0 Free Energy = -14.55 ..(((((((...........(((((((((((((((..................))))))))))))))).........))))))).. model uucggucaugcg----UuaAUGAcGgccuggcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ...((((((...........{[[(((((({({(((((..............)))))})}))))))]]}.....-...))))))... target UCCUCUGGUCCCCUGCAGAAUGAACUUUGUGUGGGAAUAUCCAUGUACUUUUUUCCCCCCAAAGUGACACUUU-UCAACCAGGUUU **** ****