------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JAGGNJ010016056.1:subseq_4915320,150000_ Strand = - Positions = 45626 - 45552
 Found by:  Infernal (score=26.62) Covels (score=27.51)
 Stem2 length = 9   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -21.87

         ..(((((((.......(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .((({(((((--....{[[{(({(((((((..................)))))))}))}]]}..--...)))))}))).
 target  GGCUUGUGUG--CUUAUGAAGAUAGCUAACAAAAGAGUGAUUAACUCAGUUAGCUUUCAGAUGC--CUUCACACCAGCA
                         ****          ^^^                         ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JAGGNJ010016056.1:subseq_4915320,150000_ Strand = + Positions = 93785 - 93859
 Found by:  Infernal (score=11.99) Covels (score=10.89)
 Stem2 length = 10   Apical loop length = 15   Insertion in stem2 = 2, 0
 Free Energy = -8.26

         ..(((((((.......(((((((...((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgc---cuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..((({(((---....{[[{((-(..{(((((((...............)))))))})))}]]}..--....)))})))..
 target  UGACACACA---AAAAUGACAU-UUUACCAGCUGAAAGUACAGCAACAAUGGCUGGAGAUCGAUCA--UUAAUGUAUGUAC
                         ****              ^^^                       ****                 

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = JAGGNJ010016056.1:subseq_4915320,150000_ Strand = - Positions = 98036 - 97962
 Found by:  Infernal (score=10.79)
 Stem2 length = 9   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -4.16

         ..(((((((.......(((((((((((((((..................))))))))))))))).........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ..(({((((.......([[((([((({(((------((..........)))))})))])))]]).....-...))))}))..
 target  CCAUCUUUGGCUCCCUUGAAGUAUUUUGUU------GUGGUGACUAGAGUGACUGAAGACUGAAGUCUG-AGGCAGAAAUAA
                         ****                                        ****