------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JAGGNJ010019611.1:subseq_14615392,150000_ Strand = + Positions = 54238 - 54305
 Found by:  Infernal (score=36.47) Covels (score=25.72)
 Stem2 length = 9   Apical loop length = 12   Insertion in stem2 = 0, 0
 Free Energy = -17.5

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         (((((((((---....{[[{(((({(((((.........-----...)))))}))))}]]}..--....)))))))))
 target  UGAGUAUUU---GUUAUGAUGGUCCCAGCCUAAAGCACU-----GGCGGCUGUGACCUGAUUC--UAGAAAAUAUUUA
                         ****           ^^^                       ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JAGGNJ010019611.1:subseq_14615392,150000_ Strand = + Positions = 109293 - 109363
 Found by:  Infernal (score=11.22) Covels (score=6.93)
 Stem2 length = 10   Apical loop length = 12   Insertion in stem2 = 2, 0
 Free Energy = -9.7

         ..(((((((.......((((((((((((..(((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggc--ccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .((((({((.......([[{((((((((..((.........-----...))))))))))}]])----....))}))))).
 target  GUGCCAGAGGCCAGCAUGAGGAGUUCUCCAUGCUAACAACA-----AAACAGAGAAUUUGGAA----UGAGCUGUGGUGG
                         ****              ^^                       ****