------- SECIS element -- id:1 -- grade:A ---- Chromosome = JAEUCK010001568.1:subseq_278306,100158_ Strand = + Positions = 89184 - 89254 Found by: Infernal (score=30.53) Covels (score=30.72) Stem2 length = 9 Apical loop length = 15 Insertion in stem2 = 0, 0 Free Energy = -22.76 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .((((((((---....([[{{((((({((((...............))))})))))}}]])----....)))))))). target CGAUGCCAG---AAGAUGACAACGUGCGCAGAAACCCCCCUGUGGGCUGCCCACGUCCGAG----CCCCCUGGCGUUU **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JAEUCK010001568.1:subseq_278306,100158_ Strand = - Positions = 37891 - 37819 Found by: Infernal (score=11.24) Covels (score=1.71) Stem2 length = 11 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -32.3 ..(((((((.......(((((((((((((((...............)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc .((((((((---(...([[((((((((((((.....---.......))))))))))))]])......-..))))))))). target GCCUGUCUC---UGGAGGAGGGCCUUGACUUGAUGG---GCUUUGGGAGUCAGGGCCUGACUCACCA-AGGGAGGCAGGG **** ****