------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JAEUCK010006337.1:subseq_264559,112961_ Strand = + Positions = 63050 - 63120
 Found by:  Infernal (score=17.18) Covels (score=24.86)
 Stem2 length = 9   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -10.07

         ..(((((((.......(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..({({{((---(...{[[{((({((((((..................))))))})))}]]}----..-)))}})})..
 target  CCCCGUCUC---UCCAUGACGGCCGAGACGUCCAGUCAGGCCCUGACCUGUCUCUGUCCGAU----GC-AGACUCAGCA
                         ****           ^^                         ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JAEUCK010006337.1:subseq_264559,112961_ Strand = - Positions = 52164 - 52091
 Found by:  Infernal (score=14.38) Covels (score=1.62)
 Stem2 length = 10   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -24.07

         ..(((((((.......((((((((((.(((((................))))).))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC-cuuuuuggggcgggc-caggcCuGAUGuuuuuucaugaccggc
         ..(({((((---((..([[(((([(({((((..................))))}))]))))]])----..))))))}))..
 target  ACGUCAGCC---UUGCUGAGGCUGGGGACCCCAAAACACAUCGGGGGGUGGGUGCCAAGCUGAG----UAAAGGUUAACUG
                         ****            ^^^                         ****                 

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = JAEUCK010006337.1:subseq_264559,112961_ Strand = + Positions = 17350 - 17417
 Found by:  Infernal (score=11.27) Covels (score=9.0)
 Stem2 length = 10   Apical loop length = 8   Insertion in stem2 = 0, 0
 Free Energy = -8.54

         ..(((((((..........(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg---UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .((((({{(..........{[[(((((((((((.......---------.)))))))))))]]}----....)}}))))).
 target  CGAGGGUCUCUGCUUUUAAUGAGAUAAUCAGUCCAACUUA---------UGGUUGGUUAUUGAC----CUUUAUUCCUUCA
                            ****           ^^                        ****