------- SECIS element -- id:1 -- grade:B ---- Chromosome = JAEUCK010004982.1:subseq_973005,100393_ Strand = + Positions = 29090 - 29166 Found by: Infernal (score=10.38) Covels (score=1.43) Stem2 length = 8 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -15.09 ..(((((((.......(((((((((((((((...............)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ...(((((((......([[(((((({(((.......-...........)))}))))))]])......-.-)))))))... target CAGAAGCUGGAAUCUGUGAGGUACUUACAGGACCAU-CAGUAGACAGAUGUUGGUACUGAACAUCUG-C-CUGGCUUGAU **** ^^ **** ------- SECIS element -- id:2 -- grade:A ---- Chromosome = JAEUCK010004982.1:subseq_973005,100393_ Strand = + Positions = 80857 - 80931 Found by: Infernal (score=10.17) Covels (score=18.35) Stem2 length = 9 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -19.53 ..(((((((.............(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcg------UuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .([(({(((.............([[((((({(((((------(..........))))))})))))]])----....)))}))]). target AGGCUCCCUGCAGGGAAACCAAUGAGGGGCUUGAUC------CCCAGACCCCAGGAUCACGCCCUGAG----CGGAAGGCAGAUG **** ^^ ****