------- SECIS element -- id:1 -- grade:B ---- Chromosome = JAEUCK010008070.1:subseq_1,83955_ Strand = + Positions = 35295 - 35374 Found by: Infernal (score=22.39) Covels (score=14.04) Stem2 length = 10 Apical loop length = 21 Insertion in stem2 = 0, 1 Free Energy = -5.6 ..(((((((.......(((((((((((((((...................))))).))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggc-caggcCuGAUGuuuuuucaugaccggc ...(({({((......{[[[((((((((((.....................))).)))))))]]]}..--..-))})}))... target GAAGUUUGUGCUCGAAUGAAGAGUGUAUCUUAAACCCUUUUUUUUUUGGAUGGAUUGCACUUGGAUAA--AA-UAGGCACCAC **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JAEUCK010008070.1:subseq_1,83955_ Strand = + Positions = 37985 - 38075 Found by: Infernal (score=10.4) Covels (score=7.02) Stem2 length = 11 Apical loop length = 20 Insertion in stem2 = 1, 0 Free Energy = -10.5 ..(((((((.......((((((((((.(((((....................)))))))))))))))................))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC-----cuuuuuggggcgggccaggcCuGAUGuu-------u-uuucaugaccggc ..(((((((.......([[{(((((((.((((....................)))))))))))}]])............-...))))))).. target ACAUGUACAUUUUAAGUGACAGUUUUAACAGUAAAACAGUGUUAAACUAAUCACUGUGAAACUUGAAAGUGUGAUGAUG-CUCUGUACAUUU **** ^^^ ****