------- SECIS element -- id:1 -- grade:B ----
 Chromosome = JAEUCK010000992.1:subseq_557153,479257_ Strand = - Positions = 409943 - 409867
 Found by:  Infernal (score=10.94)
 Stem2 length = 7   Apical loop length = 20   Insertion in stem2 = 0, 0
 Free Energy = -7.45

         ..(((((((.......(((((((((((((((................))))))))))))))).........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ....((((((--....{[[[(({(((({(....................)}))))}))]]]}.....-..))))))....
 target  CUCAGGCUUC--AGUGUGAAGAAUGGACUAGAAGGAUAAGAUUUGAGAAGAUCUGAUUGGAUGCUAC-CAGAGGCCAUUG
                         ****           ^^                         ****                  

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JAEUCK010000992.1:subseq_557153,479257_ Strand = + Positions = 104202 - 104276
 Found by:  Infernal (score=10.08)
 Stem2 length = 8   Apical loop length = 14   Insertion in stem2 = 0, 1
 Free Energy = -14.64

         ..(((((((.......(((((((((((((((................))))))))).))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccagg-cCuGAUGuu-u-uuucaugaccggc
         ..({(({((((((...([[(((({(((((.------.............)))))}).)))]]).....)-)))))}))})..
 target  CGAAGUCCUGCAUCAGUGAAGGGCUCAGUG------GCUGUGGGAACCAACUGGCCUUCUGAAAUGUUG-UGCAGCACAUGA
                         ****                                       ****