Command line: [/mnt/NFS_UPF/soft/exonerate/exonerate-2.2.0-x86_64/bin/exonerate -m p2g --showtargetgff --exhaustive yes -q query18 -t q_subseq]
Hostname: [am30741-101093u]

C4 Alignment:
------------
         Query: SPP00000112_1.0 # Protein # Selenoprotein K (SelK) # Mus musculus # Complete
        Target: PVKD010007843.1:subseq(1,76665) Cricetomys gambianus isolate US082 CriGam_scaffold_15677, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 377
   Query range: 0 -> 94
  Target range: 63805 -> 64090

     1 : MetValTyrIleSerAsnGlyGlnValLeuAspSerArgAsnGlnSerProTrpArgVal :    20
         |||||||||||||||||||||||||||||||||||| !!||||||||||||||||||:!!
         MetValTyrIleSerAsnGlyGlnValLeuAspSerTrpAsnGlnSerProTrpArgLeu
 63806 : ATGGTTTACATCTCAAATGGACAAGTGTTGGACAGCTGGAATCAGTCCCCATGGAGATTG : 63863

    21 : SerPheLeuThrAspPhePheTrpGlyIleAlaGluPheValValPhe<->PhePheLys :    39
         ||||||:!!! !|||||||||||||||  !||||||||||||:::|||   |||||||||
         SerPheIleIleAspPhePheTrpGlyProAlaGluPheValLeuPheCysPhePheLys
 63864 : TCTTTTATAATAGATTTCTTCTGGGGACCAgcagaatttgttttgttttgttttttcaaa : 63923

    40 : ThrLeuLeuGlnGlnAspValLysLysArgArgGlyTyrGlySerSerSerAspSerArg :    59
            ||||||:!!|||! !||||||||||||||||||||||||||| !!||||||||||||
         IleLeuLeuGluGlnGlyValLysLysArgArgGlyTyrGlySerProSerAspSerArg
 63924 : attcTGCTTGAACAGGGTGTGAAAAAAAGAAGAGGCTATGGAAGCCCATCTGACTCCAGA : 63983

    60 : TyrAspAspGlyArgGlyProProGlyAsnProProArgArgMetGlyArgIleSerHis :    79
         ||||||||||||||||||||||||||||||! !||| !!||||||||| !!|||!:!|||
         TyrAspAspGlyArgGlyProProGlyAsnLeuProGlyArgMetGly***IleAsnHis
 63984 : TATGATGATGGAAGAGGACCACCAGGAAACCTTCCAGGAAGAATGGGTTGAATCAATCAT : 64043

    80 : LeuArgGlyProSerProProProMetAlaGlyGlyUnkGlyArg :    94
         !!!!.!||| !!|||  !||||||||||||||||||   ||||||
         PheHisGlySerSerPheProProMetAlaGlyGly***GlyArg
 64044 : TTTCACGGCTCCAGCTTTCCTCCAATGGCTGGTGGATGAGGAAGG : 64090

vulgar: SPP00000112_1.0 0 94 . PVKD010007843.1:subseq(1,76665) 63805 64090 + 377 M 36 108 G 0 3 M 58 174
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2019-11-20
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
PVKD010007843.1:subseq(1,76665)	exonerate:protein2genome:local	gene	63806	64090	377	+	.	gene_id 1 ; sequence SPP00000112_1.0 ; gene_orientation .
PVKD010007843.1:subseq(1,76665)	exonerate:protein2genome:local	cds	63806	64090	.	+	.	
PVKD010007843.1:subseq(1,76665)	exonerate:protein2genome:local	exon	63806	64090	.	+	.	insertions 3 ; deletions 0
PVKD010007843.1:subseq(1,76665)	exonerate:protein2genome:local	similarity	63806	64090	377	+	.	alignment_id 1 ; Query SPP00000112_1.0 ; Align 63806 1 108 ; Align 63917 37 174
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis