T-COFFEE, Version_11.00.8cbe486 (2014-08-12 22:05:29 - Revision 8cbe486 - Build 477)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=1000
*
 BAD AVG GOOD
*
PVKD010031108.1   : 100
SPP00000105_1.0   : 100
cons              : 100

PVKD010031108.1   MEPLAAYPLKCSRPKVKVFAVLLSMLLCTVMLF
SPP00000105_1.0   MEPFAAYPLKCSGPKAKIFAVLLSMVLCTVMLF

cons              ***:******** **.*:*******:*******


PVKD010031108.1   LLQLKFLRPRIDSFYSFEVKDARGRMVSLEKFK
SPP00000105_1.0   LLQLKFLKPRTNSFYSFEVKDAKGRTVSLEKFK

cons              *******:** :**********:** *******


PVKD010031108.1   GKASLVVNVASDCRFTDKSYLTLKELHKEFGPY
SPP00000105_1.0   GKASLVVNVASDCRFTDKSYQTLRELHKEFGPY

cons              ******************** **:*********


PVKD010031108.1   HFNVLAFPCNQFGESEPRSSKEVESFARKNYGV
SPP00000105_1.0   HFNVLAFPCNQFGESEPKSSKEVESFARQNYGV

cons              *****************:**********:****


PVKD010031108.1   TFPIFHKIKILGPEAEPAFRFLVDSSKKEPRWN
SPP00000105_1.0   TFPIFHKIKILGPEAEPAFRFIVDSSKKEPRWN

cons              *********************:***********


PVKD010031108.1   FWKYLVNPDGQVVKFWRPEEPIEAIRPHVSQLI
SPP00000105_1.0   FWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQMI

cons              ********:************:*********:*


PVKD010031108.1   GQIILKKKEDL
SPP00000105_1.0   GQIILKKKEDL

cons              ***********