T-COFFEE, Version_11.00.8cbe486 (2014-08-12 22:05:29 - Revision 8cbe486 - Build 477)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=1000
*
 BAD AVG GOOD
*
PVKD010000980.1   : 100
SPP00000099_1.0   : 100
cons              : 100

PVKD010000980.1   MAYIAKSFYDLSAISLDGEKIDFNTFRGRAVLI
SPP00000099_1.0   MAYIAKSFYDLSAVGLDGEKIDFNTFRGRAVLI

cons              *************:.******************


PVKD010000980.1   ENVASLXGTTTRDFNQLNELQCRFPRRLVVLGF
SPP00000099_1.0   ENVASLXGTTTRDYNQLNELQCRFPRRLVVLGF

cons              *************:*******************


PVKD010000980.1   PCNQFGHQENCRNEEILNSLKYVRPGGGYQPTF
SPP00000099_1.0   PCNQFGHQENCQNEEILNSLKYVRPGGGYQPTF

cons              ***********:*********************


PVKD010000980.1   ALTQKCDVNGQNEHPVFAYLKDKLPYPYDDPFS
SPP00000099_1.0   SLTQKCDVNGQNEHPVFAYLKDKLPYPYDDPFS

cons              :********************************


PVKD010000980.1   LMTDPKFILWSPVRRSDVSWNFEKFLIGPEGEP
SPP00000099_1.0   LMTDPKLIIWSPVRRSDVSWNFEKFLIGPEGEP

cons              ******:*:************************


PVKD010000980.1   FRRYSRTFQTINIEPDIKRLLKVAI
SPP00000099_1.0   FRRYSRSFQTINIEPDIKRLLKVAI

cons              ******:******************