------- SECIS element -- id:1 -- grade:B ---- Chromosome = WARS01000012.1:subseq_0,100000_ Strand = - Positions = 36142 - 36077 Found by: Infernal (score=11.04) Covels (score=7.22) Stem2 length = 10 Apical loop length = 8 Insertion in stem2 = 0, 0 Free Energy = -26.1 ..(((((((.......(((((((((((((((.................))))))))))))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ....((({(---((..([[(((((((((((------.....-----...)))))))))))]]).....-.)))}))).... target AGUCGGCGU---GUAAUGAGGCAGCUGAAG------AUCUU-----AACCUUCAGCUGCCGAAGGACA-GACAGGUCUUUA **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = WARS01000012.1:subseq_0,100000_ Strand = + Positions = 10965 - 11032 Found by: Infernal (score=10.01) Stem2 length = 7 Apical loop length = 15 Insertion in stem2 = 0, 0 Free Energy = -8.78 ..(((((((.......(((((((((((.......................)))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccgAAAcCcuuuuuggggugggccaggcCuGAUGuuuuuucaugaccggc ..(((((((.......([[(([(((((...............--------)))))]))]])..--....))))))).. target UCCAUUUUCCGGCGUAUGAAGAAUCCUCCAAGUUUACGGAUC--------AGGGUGCUGAAAA--CAGAGAAAGUGUG **** ^^ ****