------- SECIS element -- id:1 -- grade:B ----
 Chromosome = WARS01000014.1:subseq_0,100000_ Strand = + Positions = 36365 - 36447
 Found by:  Infernal (score=14.21) Covels (score=1.83)
 Stem2 length = 9   Apical loop length = 27   Insertion in stem2 = 0, 0
 Free Energy = -10.93

         ..(((((((.......(((((((((((((((...........................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC------------cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(({(({(---((..{[[(({(((((({((...........................))}))))))}))]]}----..)))}))}))..
 target  GCUGCAGUU---UUAAUGAACUUCUUGCUGUCAACCUAGAAAACUCCUCCCACAAGGAACUGCAAGAUGUGAU----UGAAACCUCCAAA
                         ****            ^^                                   ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = WARS01000014.1:subseq_0,100000_ Strand = + Positions = 3756 - 3825
 Found by:  Infernal (score=13.17) Covels (score=6.82)
 Stem2 length = 10   Apical loop length = 17   Insertion in stem2 = 0, 0
 Free Energy = -12.73

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..((({{((.--....{[[{((((((((((.................))))))))))}]]}----.--.))}})))..
 target  CAACUCCCUG--AACAUGAUCUCAGAAAGGAACAACAACACAAGAUCCUUUUCUGAGUGAC----C--AAGUCAGUGC
                         ****          ^^                         ****                 

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = WARS01000014.1:subseq_0,100000_ Strand = - Positions = 39398 - 39329
 Found by:  Infernal (score=11.23) Covels (score=9.91)
 Stem2 length = 9   Apical loop length = 12   Insertion in stem2 = 0, 0
 Free Energy = -10.4

         ..(((((((.......(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ((([((((((......([[(((((({((((------............))))}))))))]])..--..-))))))])))
 target  GCAGGAGUAGCCUGAAUGAUGCAUUCCUUA------AACAAAUUGUUGUGAGUAAUGCAGAAAU--GU-UUGUUUAUGC
                         ****                ^^                    ****