------- SECIS element -- id:1 -- grade:B ---- Chromosome = WARS01000015.1:subseq_0,100000_ Strand = + Positions = 66307 - 66392 Found by: Infernal (score=14.8) Covels (score=0.52) Stem2 length = 9 Apical loop length = 25 Insertion in stem2 = 1, 0 Free Energy = -5.91 ..(((((((.........((((((((((.(((((.........................)))))))))))))))........))))))).. model uucggucaugcg--UuaAUGAcGgccug-gcccuAAAcC----------cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ..(((((((.........{[[{(({(((.{(([(.........................)]))})))}))}]]}----..-.))))))).. target CAGGUGUGUGCGGUUUCAUGAUGGAGCGGUGUGGAAAUGAACGAGGCCCUGAUCAGUACCAGUUUGUACCUGAU----GU-GACACACCAC **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = WARS01000015.1:subseq_0,100000_ Strand = - Positions = 83187 - 83123 Found by: Infernal (score=10.35) Covels (score=5.11) Stem2 length = 10 Apical loop length = 8 Insertion in stem2 = 0, 0 Free Energy = -15.1 ..(((((((.......(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ...({((((---....([[(((((((((((.......---------.)))))))))))]]).....-.-.))))})... target GAUAACAUA---AUGAUGAACGGCUGUGCAUCAGAGG---------UUGUACAGUUGUGAAGUCGC-U-GUAUGCUUGU **** ****