------- SECIS element -- id:1 -- grade:B ----
 Chromosome = WARS01000017.1:subseq_102982,100000_ Strand = + Positions = 49422 - 49493
 Found by:  Infernal (score=12.31) Covels (score=12.5)
 Stem2 length = 10   Apical loop length = 9   Insertion in stem2 = 1, 0
 Free Energy = -7.84

         ..(((((((............((((((((((.((.(((...............))))).))))))))))........)))))))..
 model   uucggucaugcg-----UuaAUGAcGgccug-gc-ccuAAAcCcuuuuuggggcgggc-caggcCuGAUGuuuuuucaugaccggc
         ((((((((((...........([[(((((((.--(([(.....-..-----..)])--))))))))]])----...))))))))))
 target  GCGUUUCAGGCGGCUUCUUAAUGAGUAUAUUU--GAAAAAACA-UC-----AGUGU--UGAUGUAUGAG----CGAUCUGAAACGU
                              ****             ^^^                        ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = WARS01000017.1:subseq_102982,100000_ Strand = - Positions = 62828 - 62757
 Found by:  Infernal (score=11.82) Covels (score=6.36)
 Stem2 length = 10   Apical loop length = 14   Insertion in stem2 = 1, 0
 Free Energy = -12.24

         ..(((((((.......((((((((((.(((((..................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..((((({(.--....([[(((((((.((((------..............)))))))))))]])..--....)})))))..
 target  UGUGCUGCCU--AAGAUGAAGCUGAUUGACG------GGCGGAUGUCCUGAUGUUAUUGGCUGAAGC--UCACGUUAGCAGA
                         ****                                         ****                 

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = WARS01000017.1:subseq_102982,100000_ Strand = - Positions = 91803 - 91719
 Found by:  Infernal (score=10.55)
 Stem2 length = 7   Apical loop length = 27   Insertion in stem2 = 0, 0
 Free Energy = -8.12

         ..(((((((...........((((((((((((...........................))))))))))))........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccuggcccgAAAcCcuuuuuggggugg------gccaggcCuGAUGuuuuuucaugaccggc
         .((((((((...........{[[(((({((((...........................))))}))))]]}..--..-.)))))))).
 target  UAUUUUCAGGAAGCACAGCGUGAAAGGUCUGAGCUUCUACAGCUAAUUUGGACUGAUCGUCAGUUCUUGAUGU--UA-ACUGAAAGUC
                             ****                                           ****                 

------- SECIS element -- id:4 -- grade:B ----
 Chromosome = WARS01000017.1:subseq_102982,100000_ Strand = - Positions = 66646 - 66568
 Found by:  Infernal (score=10.19) Covels (score=13.41)
 Stem2 length = 9   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -7.03

         ..(((((((.......(((((((((((((((................)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ...((((((.......{[[[[(({((((((..................))))))}))]]]]}......-.-.))))))...
 target  CUAGGGUUAGAAUACAUGAAGGUGAGAGGUUAAAACGGUCACUGACCCAUCUUUGGCAGGAUGUCGUC-U-GUGGCUCCUU
                         ****           ^^^                        ****