------- SECIS element -- id:1 -- grade:B ---- Chromosome = WARS01000046.1:subseq_102983,100000_ Strand = - Positions = 90406 - 90343 Found by: Infernal (score=15.83) Covels (score=0.91) Stem2 length = 7 Apical loop length = 10 Insertion in stem2 = 0, 0 Free Energy = -11.7 ..(((((((.......((((((((((((.....................))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccgAAAcCcuuuuuggggugggccaggcCuGAUGuu-u-uuucaugaccggc ..(((((((---....([[(((({((((..........-----------))))}))))]])......-.-.))))))).. target UCUGCAGCG---UCAAUGAAGUUCGUAUAAGUAACUCG-----------AUAUUAACUGAAAAUGAC-U-CUGCUGCAUA **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = WARS01000046.1:subseq_102983,100000_ Strand = + Positions = 81878 - 81954 Found by: Infernal (score=14.24) Covels (score=2.53) Stem2 length = 8 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -11.33 ..(((((((.......(((((((((((((((...............)))))))))))))))...........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc ...((((((---(...{[[((({(({((((.................))))}))})))]]}.......-..)))))))... target UGAGGGCGG---UGCGUGAAGCUUCCUGUUUGAAGCUACGUUUGCACGGCGCGACGCUGACGCUCGUU-CAGCCGUUUGAA **** ^^ ****