TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000632_2.0 # Protein # 15 kDa selenoprotein (Sel15) # Zebrafish

Length=146
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171018.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  88.2    8e-20


>ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold15, whole genome shotgun sequence
Length=9088374

 Score = 88.2 bits (217),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 42/45 (93%), Positives = 45/45 (100%), Gaps = 0/45 (0%)
 Frame = +2

Query  102      IKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLERI  146
                ++YVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL+RI
Sbjct  7705688  LQYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLDRI  7705822


 Score = 47.8 bits (112),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 54/58 (93%), Gaps = 0/58 (0%)
 Frame = +2

Query  9        QLASYGAELSSEACRELGFssnllcsscellGQFSLNQLDLPCRQCCQEEAQLENRKL  66
                QL++YGA+L+SEACR+LGFSSNLLCSSC+LLG+FSLN+L   C+QCCQ+EAQ+E RK+
Sbjct  7702022  QLSAYGADLTSEACRDLGFSSNLLCSSCDLLGEFSLNKLQPDCQQCCQQEAQMEARKV  7702195


 Score = 43.1 bits (100),  Expect = 4e-04, Method: Composition-based stats.
 Identities = 19/23 (83%), Positives = 20/23 (87%), Gaps = 0/23 (0%)
 Frame = +2

Query  65       KLYPGAILEVCGXKLGRFPQVQA  87
                +LY GAILEVCG KLGRFPQVQ 
Sbjct  7704821  QLYAGAILEVCG*KLGRFPQVQG  7704889



Lambda      K        H        a         alpha
   0.322    0.140    0.414    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 7513931140


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40