TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000656_2.0 # Protein # Selenoprotein X3 (SELENOX3) # Zebrafish

Length=179
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171004.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  110     3e-27


>ML171004.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold1, whole genome shotgun sequence
Length=19776732

 Score = 110 bits (276),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 0/67 (0%)
 Frame = +2

Query  1        VEIGSLWREQAVVLFFLRRFGCQVCRWMAAEVSKLEKDLKAHGIALVGIGPEETGVKEFK  60
                VE+ SLW++Q VVLFFLRRFGCQVCRWMA E+SKLE DL+A G ALVG+GPEE G+KEF 
Sbjct  3710546  VELQSLWQDQPVVLFFLRRFGCQVCRWMATEISKLEPDLRAGGAALVGVGPEEFGLKEFM  3710725

Query  61       DGGFFKG  67
                +GGFFKG
Sbjct  3710726  EGGFFKG  3710746


 Score = 60.5 bits (145),  Expect = 9e-10, Method: Composition-based stats.
 Identities = 27/38 (71%), Positives = 33/38 (87%), Gaps = 0/38 (0%)
 Frame = +1

Query  131      KGGEKVLLHFIQKSPADNPPLEEITKALGISANVQAGE  168
                KGGEKVLLHFIQ SP D+ PLE+I+KALGIS+  +AG+
Sbjct  3712705  KGGEKVLLHFIQDSPGDHVPLEDISKALGISSKAKAGQ  3712818


 Score = 49.3 bits (116),  Expect = 7e-06, Method: Composition-based stats.
 Identities = 23/30 (77%), Positives = 28/30 (93%), Gaps = 0/30 (0%)
 Frame = +1

Query  106      KASAEGIQGNFSGDLLQSGGMLIVAKGGEK  135
                +A+AEGI+GNFSGDLLQ+GGMLIV+KG  K
Sbjct  3711787  QANAEGIKGNFSGDLLQTGGMLIVSKGTVK  3711876



Lambda      K        H        a         alpha
   0.319    0.138    0.410    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 13400373096


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40