TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000650_2.0 # Protein # Selenoprotein T2 (SELENOT2) # Zebrafish

Length=210
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML173036.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  103     2e-24
SAUM01031467.1  Anarrhichthys ocellatus isolate YVR2014 contig867...  81.3    1e-16
ML172069.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  79.3    7e-16
ML171018.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  50.1    1e-13


>ML173036.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold6629, whole genome shotgun sequence
Length=2903

 Score = 103 bits (258),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 31/122 (25%)
 Frame = +3

Query  77    SISQLYPDIRIEGDNYPPKPINKYLGNFLSYFKLLAIALIVTGQNPFQMFGMNTPRIWAW  136
             S++ L+  +R  G+      + + +GN +SY KLL+I LIV+GQNPF + G++TPR W W
Sbjct  1011  SLTSLHYPLRCVGN---LLSVLRCVGNLVSYLKLLSILLIVSGQNPFVLLGLDTPRAWNW  1181

Query  137   GQENK----------------------------IFSCLMAFFISNMLETHFLSTGAFEIT  168
              Q+NK                            IFSCLMAFF+ NM+ETHFLSTGAFE+T
Sbjct  1182  SQDNKVHVTMATDDSTGYHGNGFNPVTVFVVCQIFSCLMAFFLCNMMETHFLSTGAFEVT  1361

Query  169   LN  170
             LN
Sbjct  1362  LN  1367


>SAUM01031467.1 Anarrhichthys ocellatus isolate YVR2014 contig8672_0, whole genome 
shotgun sequence
Length=1647

 Score = 81.3 bits (199),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 78/157 (50%), Gaps = 58/157 (37%)
 Frame = -2

Query  1    MAEYSQTGIltalllftvvtvKDIYVGRNSVTQ---QENTGP--------DINTQRQNKH  49
            MAEYSQ G+L ALLLFT +TV+D+Y+GR+   Q   Q   GP        D    +  K 
Sbjct  572  MAEYSQAGLLVALLLFTALTVRDVYLGRSQSPQSGQQLTEGPGLSPETPSDTGPGKPAKT  393

Query  50   TFYTGPVLKFQY-----------------------------------------------C  62
            + YTGP+L+FQY                                                
Sbjct  392  STYTGPMLRFQYW*VS*HGANRLTAVLTVSIRR*SL*QTFKSGG*GLAYLTGVSSLYVFS  213

Query  63   ISXGYSKVFQEYSRSISQLYPDIRIEGDNYPPKPINK  99
            IS GY+KVFQEYSR+ISQLYPDIRIEG+NYPP P N+
Sbjct  212  IS*GYNKVFQEYSRAISQLYPDIRIEGENYPPTPFNR  102


>ML172069.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold2138, whole genome shotgun sequence
Length=8541

 Score = 79.3 bits (194),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 40/47 (85%), Gaps = 0/47 (0%)
 Frame = +3

Query  163   GAFEITLNDIPIWSKLQSGYVPNIQELFQILDNHLKMNQADKMNFPS  209
             G F   L+D+P+WSKLQSGYVPNIQE+FQILDNHLKMNQ D M+F S
Sbjct  1875  GCFLSALSDVPVWSKLQSGYVPNIQEIFQILDNHLKMNQVDPMSFSS  2015


>ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold15, whole genome shotgun sequence
Length=9088374

 Score = 50.1 bits (118),  Expect(2) = 1e-13, Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 28/30 (93%), Gaps = 0/30 (0%)
 Frame = +1

Query  171      DIPIWSKLQSGYVPNIQELFQILDNHLKMN  200
                D+P+WSK++SG++P++Q+L QILDN +KMN
Sbjct  4062256  DVPVWSKIESGHLPSMQQLVQILDNEMKMN  4062345


 Score = 47.4 bits (111),  Expect(2) = 1e-13, Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 26/30 (87%), Gaps = 0/30 (0%)
 Frame = +2

Query  141      KIFSCLMAFFISNMLETHFLSTGAFEITLN  170
                +I++C+M FF+SNM+E   +STGAFEITLN
Sbjct  4062056  QIYACMMVFFLSNMIENQLMSTGAFEITLN  4062145


 Score = 58.5 bits (140),  Expect = 8e-09, Method: Composition-based stats.
 Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 0/44 (0%)
 Frame = +2

Query  99       KYLGNFLSYFKLLAIALIVTGQNPFQMFGMNTPRIWAWGQENKI  142
                ++  +FLS FKLL I LI+ G++PF + GM  P +W WGQ NK+
Sbjct  4061165  RHFASFLSVFKLLVIGLIIIGRDPFALIGMQAPGLWEWGQGNKV  4061296


 Score = 54.3 bits (129),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 26/71 (37%), Positives = 39/71 (55%), Gaps = 0/71 (0%)
 Frame = +2

Query  29       NSVTQQENTGPDINTQRQNKHTFYTGPVLKFQYCISXGYSKVFQEYSRSISQLYPDIRIE  88
                N      +  P +  Q    + F T   +     IS GY +VF+EY++++ Q YPDIRIE
Sbjct  4059341  NHCIVVASVCPCLMLQLHTVYVFLTCVCVLSSRSIS*GYKRVFEEYTQALYQRYPDIRIE  4059520

Query  89       GDNYPPKPINK  99
                G+NY P P+ +
Sbjct  4059521  GENYLPVPLYR  4059553



Lambda      K        H        a         alpha
   0.321    0.137    0.421    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 19286360780


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40