TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000651_2.0 # Protein # Selenoprotein T1b (SELENOT1b) #
Zebrafish

Length=193
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171018.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  67.0    9e-22
ML173036.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  69.3    1e-12
SAUM01031467.1  Anarrhichthys ocellatus isolate YVR2014 contig867...  53.1    3e-07
ML172069.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  51.6    1e-06


>ML171018.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold15, whole genome shotgun sequence
Length=9088374

 Score = 67.0 bits (162),  Expect(2) = 9e-22, Method: Compositional matrix adjust.
 Identities = 29/41 (71%), Positives = 37/41 (90%), Gaps = 0/41 (0%)
 Frame = +1

Query  153      DVPVWSKLQSGHLPSMQQLVQILENEMKLSVHMDSLPHRRA  193
                DVPVWSK++SGHLPSMQQLVQIL+NEMK++VHM++  H  +
Sbjct  4062256  DVPVWSKIESGHLPSMQQLVQILDNEMKMNVHMNTGTHLHS  4062378


 Score = 57.4 bits (137),  Expect(2) = 9e-22, Method: Compositional matrix adjust.
 Identities = 26/30 (87%), Positives = 28/30 (93%), Gaps = 0/30 (0%)
 Frame = +2

Query  123      KIYACTMVFFLSNMIENQCMSTGAFEVTLN  152
                +IYAC MVFFLSNMIENQ MSTGAFE+TLN
Sbjct  4062056  QIYACMMVFFLSNMIENQLMSTGAFEITLN  4062145


 Score = 69.7 bits (169),  Expect = 1e-12, Method: Composition-based stats.
 Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = +2

Query  81       RHIASFLSVFKLVVIGLIILGKNPFTYLHIETPGIWLWAQENKIYACTMVFFLSNMIENQ  140
                RH ASFLSVFKL+VIGLII+G++PF  + ++ PG+W W Q NK+     V     + E+ 
Sbjct  4061165  RHFASFLSVFKLLVIGLIIIGRDPFALIGMQAPGLWEWGQGNKVRFTIRVIKDQIVWESI  4061344

Query  141      CM-STGAFEVTLNDVPVWSK  159
                C     A +VT N    W K
Sbjct  4061345  CF*QVNATDVTRNLYKKWRK  4061404


 Score = 65.9 bits (159),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 0/37 (0%)
 Frame = +2

Query  45       VSXGYRRVFEEYTRVLTQRYPDIRIEGENFLPQPLYR  81
                +S GY+RVFEEYT+ L QRYPDIRIEGEN+LP PLYR
Sbjct  4059443  IS*GYKRVFEEYTQALYQRYPDIRIEGENYLPVPLYR  4059553


>ML173036.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold6629, whole genome shotgun sequence
Length=2903

 Score = 69.3 bits (168),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 28/100 (28%)
 Frame = +3

Query  81    RHIASFLSVFKLVVIGLIILGKNPFTYLHIETPGIWLWAQENK-----------------  123
             R + + +S  KL+ I LI+ G+NPF  L ++TP  W W+Q+NK                 
Sbjct  1068  RCVGNLVSYLKLLSILLIVSGQNPFVLLGLDTPRAWNWSQDNKVHVTMATDDSTGYHGNG  1247

Query  124   -----------IYACTMVFFLSNMIENQCMSTGAFEVTLN  152
                        I++C M FFL NM+E   +STGAFEVTLN
Sbjct  1248  FNPVTVFVVCQIFSCLMAFFLCNMMETHFLSTGAFEVTLN  1367


>SAUM01031467.1 Anarrhichthys ocellatus isolate YVR2014 contig8672_0, whole genome 
shotgun sequence
Length=1647

 Score = 53.1 bits (126),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 22/38 (58%), Positives = 29/38 (76%), Gaps = 0/38 (0%)
 Frame = -2

Query  44   CVSXGYRRVFEEYTRVLTQRYPDIRIEGENFLPQPLYR  81
             +S GY +VF+EY+R ++Q YPDIRIEGEN+ P P  R
Sbjct  215  SIS*GYNKVFQEYSRAISQLYPDIRIEGENYPPTPFNR  102


>ML172069.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold2138, whole genome shotgun sequence
Length=8541

 Score = 51.6 bits (122),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 32/38 (84%), Gaps = 0/38 (0%)
 Frame = +3

Query  145   GAFEVTLNDVPVWSKLQSGHLPSMQQLVQILENEMKLS  182
             G F   L+DVPVWSKLQSG++P++Q++ QIL+N +K++
Sbjct  1875  GCFLSALSDVPVWSKLQSGYVPNIQEIFQILDNHLKMN  1988



Lambda      K        H        a         alpha
   0.325    0.138    0.421    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 16038986060


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40