TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000639_2.0 # Protein # Selenoprotein N (SELENON) # Zebrafish

Length=557
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171010.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  122     3e-79


>ML171010.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold7, whole genome shotgun sequence
Length=13290546

 Score = 122 bits (307),  Expect(4) = 3e-79, Method: Compositional matrix adjust.
 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 0/74 (0%)
 Frame = -3

Query  145      LGVSHSSLSGLRSWKRPAISSSTFYASQFKVFLPPSGKSAVGDTWWIIPSELNIFTGYLP  204
                L VSHSSLSGLRSWK PA+  S+F A+QF+  LPP  K  VGDTWW+IPSELNIFTGYLP
Sbjct  5823847  LQVSHSSLSGLRSWKSPAVPFSSFSATQFRALLPPKNKVGVGDTWWVIPSELNIFTGYLP  5823668

Query  205      NNRFHPPTPRGKEV  218
                NNR+HPP+P+GKEV
Sbjct  5823667  NNRYHPPSPKGKEV  5823626


 Score = 89.0 bits (219),  Expect(4) = 3e-79, Method: Compositional matrix adjust.
 Identities = 39/43 (91%), Positives = 43/43 (100%), Gaps = 0/43 (0%)
 Frame = -1

Query  217      EVLIHSLLSMFHPRPFVKSRFAPQGAVACIRATSDFYYDIVFR  259
                +VLIHSLLSMFHPRPF+KSRFAPQGAVACIRA++DFYYDIVFR
Sbjct  5823552  QVLIHSLLSMFHPRPFIKSRFAPQGAVACIRASNDFYYDIVFR  5823424


 Score = 80.5 bits (197),  Expect(4) = 3e-79, Method: Compositional matrix adjust.
 Identities = 37/47 (79%), Positives = 41/47 (87%), Gaps = 0/47 (0%)
 Frame = -2

Query  101      LTGVAPPPEYEEEIPHDPNGETLTLHAKMQPLLLESMTKSKDGFLGV  147
                L G+ PP ++EEE  HDPNGETLTL AKMQPLLL+SMTKSKDGFLGV
Sbjct  5824091  LAGITPPVDFEEEETHDPNGETLTLEAKMQPLLLDSMTKSKDGFLGV  5823951


 Score = 69.3 bits (168),  Expect(4) = 3e-79, Method: Compositional matrix adjust.
 Identities = 31/42 (74%), Positives = 36/42 (86%), Gaps = 0/42 (0%)
 Frame = -1

Query  64       EAGLKALGADGLFFFSSLDTDHDLYLSPEEFKPIAEKLTGVA  105
                E  ++ LGA+GLF FSSLDTDHDLYLSPEEF+PI EKLTG +
Sbjct  5824308  EESVRTLGAEGLFLFSSLDTDHDLYLSPEEFRPIVEKLTGTS  5824183


 Score = 97.8 bits (242),  Expect(2) = 4e-33, Method: Compositional matrix adjust.
 Identities = 44/65 (68%), Positives = 55/65 (85%), Gaps = 0/65 (0%)
 Frame = -3

Query  332      QMELGAEGPSTPSVIYDEQGNMIDSRGEGGEPIQFVFEEIVWSEELKREEASRRLEVTMY  391
                Q+EL + GPSTPS+I DE GN+ID+R  G EPIQFVFE+I W+ E+ R+EA+RRLEVT+Y
Sbjct  5821786  QLELQSTGPSTPSIIMDESGNIIDNRDGGDEPIQFVFEDIHWTSEISRQEATRRLEVTLY  5821607

Query  392      PFKKV  396
                PFKKV
Sbjct  5821606  PFKKV  5821592


 Score = 67.4 bits (163),  Expect(2) = 4e-33, Method: Compositional matrix adjust.
 Identities = 31/37 (84%), Positives = 32/37 (86%), Gaps = 0/37 (0%)
 Frame = -2

Query  395      KVPYLPFSEAFSRASAEKKLVHSILLWGALDDQSCXG  431
                +V YLPFSEAF RA AE KLVHSILLWGALDDQSC G
Sbjct  5821511  QVSYLPFSEAFERAEAENKLVHSILLWGALDDQSC*G  5821401


 Score = 138 bits (347),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 67/106 (63%), Positives = 76/106 (72%), Gaps = 29/106 (27%)
 Frame = -3

Query  259      RIHAEFQLNDVPDFPFWFTPGQFAGHIILSKDASHVRDFHIYVPND--------------  304
                RIHAEFQLNDVPDFPFWFTPG+F GHI+LSKDASHVR+FH+YVPND              
Sbjct  5822647  RIHAEFQLNDVPDFPFWFTPGKFTGHIVLSKDASHVRNFHLYVPNDR*NLQTRTTLPLCT  5822468

Query  305      ---------------KTLNVDMEWLYGASETSNMEVDIGYLPQMEL  335
                               ++LNVDMEWLYGASE+SNMEVDIGYLPQ++L
Sbjct  5822467  QSPLSVV*LYILLCVRSLNVDMEWLYGASESSNMEVDIGYLPQVQL  5822330


 Score = 73.2 bits (178),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 35/38 (92%), Positives = 38/38 (100%), Gaps = 0/38 (0%)
 Frame = -1

Query  431      GSGRTLRETVLESSPVLALLNQSFISSWSLVKELEDLQ  468
                GSGRTLRETVLESSPVLALLNQSFISSWSLV+ELE++Q
Sbjct  5821200  GSGRTLRETVLESSPVLALLNQSFISSWSLVRELENMQ  5821087


 Score = 59.3 bits (142),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 31/37 (84%), Gaps = 0/37 (0%)
 Frame = -3

Query  468      QGDVKNLELSEKARLHLEKYTFPVQMMVVLPNGTVVH  504
                Q D +N  LSEKARLHLEKY FPV+MMV +PNGT+V+
Sbjct  5821000  QADEQNPVLSEKARLHLEKYNFPVEMMVAMPNGTIVN  5820890


 Score = 90.1 bits (222),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 42/53 (79%), Positives = 46/53 (87%), Gaps = 0/53 (0%)
 Frame = -3

Query  503      VHHINANNFLDQTSMKPEDEGPGLSFSAGFEDPSTSTYIRFLQEGLEKAKPYL  555
                VHHINAN FLD+T+MKPE+EG   SFS GFEDPSTSTYI FL+EGLEKAK YL
Sbjct  5820643  VHHINANFFLDETAMKPEEEGATFSFSGGFEDPSTSTYISFLKEGLEKAKEYL  5820485



Lambda      K        H        a         alpha
   0.318    0.136    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 87447894988


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40