TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000633_2.0 # Protein # Selenoprotein K (SELENOK) # Zebrafish

Length=94
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171008.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  52.4    5e-08


>ML171008.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold5, whole genome shotgun sequence
Length=16171435

 Score = 52.4 bits (124),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 23/32 (72%), Positives = 28/32 (88%), Gaps = 0/32 (0%)
 Frame = -3

Query  6         NGQVLDSRSRSPWSLSFLTDFFWGAVEFIGLF  37
                 +G+VLDSRS+SPWSLS+L D FWGAV+F GL 
Sbjct  15413903  SGRVLDSRSQSPWSLSYLVDLFWGAVDFFGLL  15413808



Lambda      K        H        a         alpha
   0.322    0.135    0.416    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5087796500


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40