TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000615_2.0 # Protein # Fish selenoprotein 15 (SELENOE) #
Zebrafish

Length=138
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171012.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  80.9    2e-17


>ML171012.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold9, whole genome shotgun sequence
Length=11052619

 Score = 80.9 bits (198),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 37/41 (90%), Positives = 40/41 (98%), Gaps = 0/41 (0%)
 Frame = +2

Query  98        MKADEISSLLDSLGFYKRSEKGEEVPEEFKHFPLRAPRDEL  138
                 MKA+EISSLLDSLGFYKRS+KGEEVPEEF+HFPLR PRDEL
Sbjct  10099661  MKAEEISSLLDSLGFYKRSQKGEEVPEEFQHFPLRPPRDEL  10099783


 Score = 47.0 bits (110),  Expect = 1e-05, Method: Composition-based stats.
 Identities = 22/27 (81%), Positives = 24/27 (89%), Gaps = 0/27 (0%)
 Frame = +3

Query  38        LVAPSVVGXSIKKMPELYNFLMERWAL  64
                 L APSVVG  IKKMPEL++FLMERWAL
Sbjct  10098210  LQAPSVVG*GIKKMPELHHFLMERWAL  10098290


 Score = 41.6 bits (96),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 18/27 (67%), Positives = 21/27 (78%), Gaps = 0/27 (0%)
 Frame = +2

Query  58        LMERWALYHNLEYDSGEDKNPRLIFYN  84
                 L+  +   HNLEYDS E+KNPRLIFYN
Sbjct  10098533  LIPSFLCSHNLEYDSSEEKNPRLIFYN  10098613



Lambda      K        H        a         alpha
   0.315    0.134    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 6296126412


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40