TBLASTN 2.7.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           10,816 sequences; 612,774,492 total letters



Query= SPP00000663_2.0 # Protein # Phosphoseryl-tRNA kinase  (PSTK) #
Zebrafish

Length=205
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ML171007.1  Anarrhichthys ocellatus isolate YVR2014 unplaced geno...  61.2    9e-10


>ML171007.1 Anarrhichthys ocellatus isolate YVR2014 unplaced genomic scaffold 
scaffold4, whole genome shotgun sequence
Length=16548284

 Score = 61.2 bits (147),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 7/89 (8%)
 Frame = -2

Query  61       EWKQHRKTVLACLERFLQHSLSEQTHTLPETHTLCEQADAGVWMR-FEQLLRDQSVFLSH  119
                EWK HR+ VL C+E+FL+    +    LP++     Q +   W R  + LL+  ++  S 
Sbjct  6075895  EWKLHRQAVLRCVEQFLEKP--QVLAELPDSR----QINRAAWERCIQALLQPGALDRSQ  6075734

Query  120      THSQPLVLLLDDNFYYQSMRQQIQQLARR  148
                    PL+ LLDDNFYY SMR ++ QLAR+
Sbjct  6075733  ADQPPLLFLLDDNFYYPSMRYEVYQLARK  6075647


 Score = 52.8 bits (125),  Expect = 7e-07, Method: Composition-based stats.
 Identities = 22/45 (49%), Positives = 31/45 (69%), Gaps = 0/45 (0%)
 Frame = -2

Query  150      TCGFCQVFLQCSLGVCVQRNRLRVRPLPDAVLLQMSERLEPPDSR  194
                + GFCQV+LQC L  C+ RNR R  P+P  V+ +M +RLE P+ +
Sbjct  6075352  SLGFCQVYLQCDLESCISRNRTRSEPIPTEVISEMVKRLESPNPQ  6075218


 Score = 51.6 bits (122),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 29/43 (67%), Gaps = 0/43 (0%)
 Frame = -2

Query  12       ACLCLLFGLPAAGKSRLAEQLRGHAHSRGWRTLTVTYDLLIPE  54
                ACLC+L GLPAAGKS LA ++   A  RGWR   V YD LI E
Sbjct  6076633  ACLCVLCGLPAAGKSTLAREVLSTAAQRGWRASVVPYDDLILE  6076505



Lambda      K        H        a         alpha
   0.325    0.135    0.425    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 18271289160


  Database: genome.fa
    Posted date:  Oct 26, 2019  7:49 PM
  Number of letters in database: 612,774,492
  Number of sequences in database:  10,816



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40